TCONS_00057049-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057049-protein
Unique NameTCONS_00057049-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length360

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057049-protein ID=TCONS_00057049-protein|Name=TCONS_00057049-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
TKELETAGKKVIKAVQGLTFDLESISKRPKGDSLLQLQPFKDDEGIIRVG
GRLKKSSLQIELKHPIILPKAHPLSKMILRWCHIKAAHSGRGLTINEVRT
SGYWIIGISSLTRSFITSCVLCRRFRGKQMQQKMADLPEDRLEPEPPFTY
AAVDMFGPFAIKVRRATVKNYVGLFTCMSSRAVHLESTTSMNTDAFILML
RRVIARRGNIRSLRSDNGTNFVGADNEMKKAIHELDHERINDFLQGNGGE
WLHWKKNPPKASHMGGVWERQIRSFSRRLIYIVGSTGEEFNTLPTSFGPA
GGRNISQPYNPDQNGINYKETSKSTTSSSSTMRAVIETTGNLDELLMSIE
AMMATFEAPN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035943XLOC_035943Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057049TCONS_00057049Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350Expect = 1.2E-20 / Score = 73.3Score = Score = SequenceG3DSA:3.30.420.10SSF53098mobidb-lite
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 138..297
e-value: 1.2E-20
score: 73.3
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 142..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..331

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057049-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350Sequence
Match NameE-valueIdentityDescription
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