TCONS_00057112-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057112-protein
Unique NameTCONS_00057112-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length502

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057112-protein ID=TCONS_00057112-protein|Name=TCONS_00057112-protein|organism=Clytia hemisphaerica|type=polypeptide|length=502bp
MNKKLKTFTCLKRTDYRKGTKERHDDISYQSPVDPNNNFRTDHDGGVSYQ
AHIDPNDNAKIDHHGDISYEAPIDPNDSVRIDHDGGVSYQAPINPNEDTE
LIDPNNNQASVNSPFLESDQQSFSSIDILANFYSMAGFGDLQNSKNFSEH
EYEGSDIPEDSSNSPVPPRKKTRIEPPYHMEPNNYEPPIHTISYQAPRSP
SYTNLTPISLKVKQEPPEIDTLTNLEPVSYQVPRSPSYTKLTPKVKQELP
EIDTLTNLESVSYQALINPNNNGAVNSRISDPAPIDPKVKQENDFISNFQ
IKKEIIDHPISYQAPINSNNNGAVNSRISDPAPIDPKVKQENDFISNFQI
KKEIIDHPISYQAPINSNNNGAVNSRISDLTPIDPKVKQENVTSNFHIKK
EIIDHPISYQAHIVHNNNEAPLDPYAARRCHLCSAVFSTQAVLEEHVETW
PHYPCHFCKMRFFDQIEYQKHYDSRHSRRKVSLDSEANEFKGFNGXQEEK
FH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035974XLOC_035974Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057112TCONS_00057112Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 428..452
e-value: 16.0
score: 11.5
coord: 453..476
e-value: 0.11
score: 21.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 455..476
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 453..481
score: 8.517
NoneNo IPR availableGENE3D2.160.10.10coord: 289..499
e-value: 3.6E-5
score: 22.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057112-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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