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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00057203-protein ID=TCONS_00057203-protein|Name=TCONS_00057203-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2982bp
MSNPQNVNQRKNTQVTINPTTLAQNYNVALAQYAATTAANKNAATALANK
NPVTGSTIKNTSASINKNPATALANKNVASASANKNTAASAANKSALTVA
ANKSPATASTNKSATTGSANKSVAATTPNKPVNTASTNKNGVDSTNLKAR
TIPPNTTVPASPSTQATTKTEAKTTTTTVSAASLAEKIKDDNLQRLTDTR
SKVLKHYSSTLEDLKRNFQETITQLFFIQSGGNMVDYPAWKGRPTPHLVS
YLTSQRLDDSKLVFPSVTSSGSSKTENVSLKKSIKQEPVDSIAMEKYGFV
QGSHVAPHHKEKSSKHSHDSKSLLHTDSDKKPQLNASGHVVSQKTSSSGS
TDIAGQVRHESETLHRIGELRKNGLWSASRLPKVFEIPRKKSHWDFLLEE
MQWLATDFSQEKRWKRNMAKKLSRAVLKYHHDKGIQEKRLKREETARLRR
IASGIAKEVKNFWQQIEKVASYKQQSRQEEQRRKALDLHLNFIVGQTEKY
SSWLAEGMKESATASPASEYPESEMKEESDEEIDEEKEDEDYQDELDALK
KEGEIPIEDLLDTLPESMLKRITGEANSDSETDVDDGGDYSEDSEDDSEE
DVSDIESEDEQGDEEEQQQEEEEEETNVSMLQKKEEDLAEEDDGGEFVLR
KCDEEKDDEETIAEEEKLQKDADYQSELDDLQKEGELPLEELLKLYGQPP
PTPSDTGMESDDEDNTDIIKGDDTSKKEEKIVGVATTEELNNAAATAESL
QPKGFTLSTTQVRTKIPHLLRGTLREYQHIGLDWLVTMYTKQLNGILADE
MGLGKTIQTIALLAHLACEEETWGPHLIVVPTSVMLNWEFEIKKWCPAFK
ILTYFGSQKERKLKRTGWSKPNAFHVCITSYKLVIQDHQAFRRRKWRYLI
LDEAQNIKNFKSQRWQTLLNFHSQRRLLLTGTPLQNNLMELWSLMHFLMP
NIFQSHQDFKEWFSNPLTGMIEGSREYNEGLVKRLHSVLRPFLLRRLKAE
VELQMPKKYEHVIKCRLSKRQRFLYDEFMSRTKTKETLEAGNFLSVINIL
MQLRKVCNHPDLFELRPTVSPFVMDQLTVPLPSLVNKPLDYNPFTQIDLS
SLNLCLSDLELKMTAFQAYRTQHLKVNKTLIQELDTPTPSLFKRTHSNIS
GSTEVKSLSNISEGKPTVIAESEEKRNLFDVLKNSCADDGNTSQDSEVSD
AECVDVEKTKDGSSSEGPPAKRAKIELEAGVSKDDADAEGEVQEVVINDG
KRLLDRFQESESTEFTLDTMSERVKAYQKGRFDLLATMNERHCEATPVYG
ADLIDCMKIVPTSCRTTMAIFTGALSHQTPRQKLCDCLCDVIKLPKTRVR
ERQGITNRYSLYTHRMVASPIKMRTTNSIPYNERRDDHLSKSLVVSTRGT
NDVYHSIGIQKMLQFPETRLVQYDCGKLQALDRLLRQMKLGKHRGLIFTQ
MTKMLDVLERFLNFHGYIYLRLDGATKVEQRQVLMERFNQDDKIFIFILS
TRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLI
SDRTVEETILKKAQQKRMLCDMAIEGGNFTTAFFKEDSVHDLFNVSVTEE
KSATADDVVVPTSNKRKTVSDEKEKKDGEINEEKSVEASKDAPKITNEQY
EKALAETEEKDDVVAAERAKVEQDSELQEFNDNTGENAENSKVEVALSML
EAELKPVERLALRFVERTNTYAVEDEVEETEKMLEGKKKEWELNHLQSLK
EAEERKNAEEEDDMLFTYIRDDSYDQHYIDEKCGMVMPIWTPPTPPREGE
VENATDYSTLFLYEMDTIPENHLPPIHYLKKNGMDLYAMKKNTNRTHYVS
LFKKKRHRISKPKSIFDKKALELLNRSKLKKSQKLKQKAMTVPVAPSTVT
SRPDFSQHGPEWLINEDWALLQAVQTIFELPLDFQNETMLNKLSNWDLAA
DIVNVTSKVRRSGRQCRDRYQNVLLPREEGKLMLATSETNEVKVKKSKKL
QQQQAAQQAAQQAQQNATGQPPTSAPPPAKPSHPQPKTSTQFSTDSGKSC
LSMHHNKFESVRKAAAKRKPVVKQAASAKFQNASRHAQILAANKISQDKI
LNPKELATMRADRIAKEKAQAVVAAQQLQQHQSANSTTSATSNTPGQTTA
TTLNAKGAIATQAQVASAARSAQLVQQGATIQSIKGKISGNVVGVTGGGN
TLVVNPSPSVVGSVTSNVGGLNTTAASFAAINRKMQNVAQVTVSQIPASI
SNGRILGVQAGQGTTTQIIPNIVQNKVSGTVQQQAGTLTVAVSSGAPTNI
VGANLVPQIQRQASVSTAAGLITTQPFIQGKTFTHHQIAILRQKAAQQQQ
QQQQQAQAQQQQLKLQQQRQLQQKQQQLKLLQQQQVGQLQAQQQQTSTQQ
TVNQQQHIQTNTKTQQGVVSSNQLGSLTVQTLKAPVTLRGNVSQQIQPSA
TATQQQQLIHQALKGKQPLHVLQRTASNSQIQQMLAGQKLTPQQLQQLQQ
QRLQQQQQQQLKLQQQQATAAIVSQQPKAQLVMTQVKTGQTGVGQKQIQL
QQLQQPGSIAGSIQQQILLRSSPSSVKPGQTQYQSIPQQIQLRAVISQQS
ALPRVSGTAAAALQPMQAQVNLQAGTVVMQPSSTQQGTTQVQVVSSLAQQ
QQRNITAAVQKQIQQQQQAHQQQQQQNQQTKVEVLGCIAASNTNITKPTQ
VQVQLQQPISHLSQQLQRQQVLSATPAQLSQVKAFVSQAQLQASLSRSNS
PLGAALATQQSVKSAIAAAAASNLSSAASQAGQQQVVTVTCGTHSQATVQ
LQASMPQLRTQVAQQQVAQSPQQAKTVDAVASASALLLQQKQQQQQKQQQ
LKLQQQAAANKLAQQKQQFLQQQSQQLVQQAAATRISQQQQQIQAQVQQA
QQQVQQQTTTPTSFTVDTSSASQQVVVDTQQVTDGSQMQVANQVEVGAET
ELSTADDTSSEATDATLPRGMRTRTRSNTKSS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 2883..2910 |
| None | No IPR available | COILS | Coil | Coil | coord: 664..684 |
| None | No IPR available | COILS | Coil | Coil | coord: 605..641 |
| None | No IPR available | COILS | Coil | Coil | coord: 2495..2516 |
| None | No IPR available | COILS | Coil | Coil | coord: 2841..2880 |
| None | No IPR available | COILS | Coil | Coil | coord: 2656..2683 |
| None | No IPR available | COILS | Coil | Coil | coord: 1663..1683 |
| None | No IPR available | COILS | Coil | Coil | coord: 1743..1763 |
| None | No IPR available | COILS | Coil | Coil | coord: 1996..2016 |
| None | No IPR available | COILS | Coil | Coil | coord: 532..552 |
| None | No IPR available | COILS | Coil | Coil | coord: 2341..2384 |
| None | No IPR available | GENE3D | 1.10.1660.10 | | coord: 2161..2417
e-value: 0.001
score: 18.4 |
| None | No IPR available | GENE3D | 3.40.50.10810 | | coord: 744..995
e-value: 1.1E-57
score: 194.5 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 1414..1577
e-value: 8.9E-38
score: 128.7 |
| None | No IPR available | GENE3D | 1.10.10.60 | | coord: 1910..2024
e-value: 3.1E-5
score: 23.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1189..1221 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 103..174 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 511..674 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2938..2982 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2126..2150 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1603..1645 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 697..725 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1989..2051 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 304..359 |
| None | No IPR available | CDD | cd00046 | DEXDc | coord: 794..933
e-value: 2.51732E-23
score: 98.9487 |
| None | No IPR available | CDD | cd00079 | HELICc | coord: 1416..1547
e-value: 7.04676E-30
score: 117.339 |
| IPR001650 | Helicase, C-terminal | SMART | SM00490 | helicmild6 | coord: 1456..1539
e-value: 2.2E-24
score: 97.0 |
| IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 1427..1539
e-value: 3.9E-18
score: 65.7 |
| IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 1430..1580
score: 17.764 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | SMART | SM00487 | ultradead3 | coord: 770..962
e-value: 4.7E-33
score: 125.8 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 786..951
score: 25.964 |
| IPR014012 | Helicase/SANT-associated domain | SMART | SM00573 | bromneu2 | coord: 382..453
e-value: 2.9E-22
score: 90.0 |
| IPR014012 | Helicase/SANT-associated domain | PFAM | PF07529 | HSA | coord: 388..451
e-value: 6.9E-18
score: 64.7 |
| IPR014012 | Helicase/SANT-associated domain | PROSITE | PS51204 | HSA | coord: 381..453
score: 21.679 |
| IPR000330 | SNF2-related, N-terminal domain | PFAM | PF00176 | SNF2_N | coord: 788..1062
e-value: 6.3E-68
score: 228.9 |
| IPR017877 | Myb-like domain | PROSITE | PS50090 | MYB_LIKE | coord: 1912..1974
score: 6.713 |
| IPR017877 | Myb-like domain | PROSITE | PS50090 | MYB_LIKE | coord: 368..418
score: 3.973 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 1418..1596
coord: 998..1079 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 755..996 |
Blast
BLAST of TCONS_00057203-protein vs. Swiss-Prot (Human)
Match: SRCAP (Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3) HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0 Identity = 295/427 (69.09%), Postives = 356/427 (83.37%), Query Frame = 0
Query: 712 DEDNTDIIKGDDTSKKEEKIVGVATTEELNNAAATAESLQPKGFTLSTTQVRTKIPHLLRGTLREYQHIGLDWLVTMYTKQLNGILADEMGLGKTIQTIALLAHLACEEETWGPHLIVVPTSVMLNWEFEIKKWCPAFKILTYFGSQKERKLKRTGWSKPNAFHVCITSYKLVIQDHQAFRRRKWRYLILDEAQNIKNFKSQRWQTLLNFHSQRRLLLTGTPLQNNLMELWSLMHFLMPNIFQSHQDFKEWFSNPLTGMIEGSREYNEGLVKRLHSVLRPFLLRRLKAEVELQMPKKYEHVIKCRLSKRQRFLYDEFMSRTKTKETLEAGNFLSVINILMQLRKVCNHPDLFELRPTVSPFVMDQLTVPLPSLVNKPLDYNPFTQIDLSSLNLCLSDLELKMTAFQA--YRTQHLKVNKTLIQELDT 1136
DE+ ++ G +G +E+ + AA AESLQPKG+TL+TTQV+T IP LLRG LREYQHIGLDWLVTMY K+LNGILADEMGLGKTIQTI+LLAHLACE+ WGPHLI+VPTSVMLNWE E+K+WCP+FKILTY+G+QKERKLKR GW+KPNAFHVCITSYKLV+QDHQAFRR+ WRYLILDEAQNIKNFKSQRWQ+LLNF+SQRRLLLTGTPLQN+LMELWSLMHFLMP++FQSH++FKEWFSNPLTGMIEGS+EYNEGLVKRLH VLRPFLLRR+K +VE QMPKKYEHVI+CRLSKRQR LYD+FM++T TKETL G+F+SVINILMQLRKVCNHP+LF+ RP SPF+ + SLV + D +P +ID+ +L LE +++ ++A + +H ++++ ++ E+ T
Sbjct: 558 DEEQSEADAGSGPPTPGPTTLG--PKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLI--GLEGRVSRYEADTFLPRH-RLSRRVLLEVAT 979 HSP 2 Score: 404.831 bits (1039), Expect = 6.831e-113 Identity = 220/512 (42.97%), Postives = 297/512 (58.01%), Query Frame = 0
Query: 1265 FTLDTMSERVKAYQKGRFDLLATMNERHCEATPVYGADLIDCMKIVPTSCRTTMAIFTGALSHQTPRQKLCDCLCDVIKLPKTRVRERQGITNRYSLYTHRMVASPIKMRTTNSIPYNERRDDHLSKSLVVSTRGTNDVYHSIGIQKMLQFPETRLVQYDCGKLQALDRLLRQMKLGKHRGLIFTQMTKMLDVLERFLNFHGYIYLRLDGATKVEQRQVLMERFNQDDKIFIFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISDRTVEETILKKAQQKRMLCDMAIEGGNFTTAFFKEDSVHDLFNVSVTEEKSATADDVVVPTSNKRKTVSDEKEKKDGEINEEKSVEASKDAPKITNEQYEKALAETEEKDDVVAAERAKVEQDSELQEFNDNTG--------------ENAENSKVEVALSMLEAELKPVERLALRFVERTNTYAVEDEVEETEKMLEGKKKEWELNHLQSLKEAEERKNAEEED 1762
F LD++ E+ K + R + + ++E H PVYG +++D + P + + + SH T + + P+ R+ + I R+ + A P + + P+ R + L H I QFP+ RL+QYDCGKLQ L LLRQ+K HR LIFTQMT+MLDVLE+FL +HG++YLRLDG+T+VEQRQ LMERFN D +IF FILSTRSGGVGVNLTGADTV+FYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLIS+RTVEE ILKKA QKRML DMAIEGGNFTTA+FK+ ++ +LF++ + E S++ EE+ ASK E+AL E+++D+ AA +AK EQ +EL EFN+N G E+ E S+ E ++ L +L P+ER A++F+E + +E+++ E+ +E +K+ L KE R EEE+
Sbjct: 1884 FYLDSLEEKRKRQRSERLERIFQLSEAHGALAPVYGTEVLDFCTL-PQPVASPIGPRSPGPSHPT-FWTYTEAAHRAVLFPQQRLDQLSEIIERFIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLASELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEEPSSSSVPSAP---------------------EEEEETVASKQ-----THILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFPAGEGEEAGRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKD-----LDQAKEEVFRLPQEEEE 2362 HSP 3 Score: 220.32 bits (560), Expect = 7.093e-57 Identity = 97/170 (57.06%), Postives = 129/170 (75.88%), Query Frame = 0
Query: 352 DIAGQVRHESETLHRIGELRKNGLWSASRLPKVFEIPRKKSHWDFLLEEMQWLATDFSQEKRWKRNMAKKLSRAVLKYHHDKGIQEKRLKREETARLRRIASGIAKEVKNFWQQIEKVASYKQQSRQEEQRRKALDLHLNFIVGQTEKYSSWLAEGMKESATASPASEYP 521
+IA Q +HE+E RI ELRK G WS RLPKV E PR K HWD+L EEMQWL+ DF+QE+RWKR +A+K+ R V+++H ++ +E+R +REE A+LRRIAS +AK+V+ FW +EKV +KQQSR EE+R+KALDLHL+FIVGQTEKYS L++ + + T+S A P
Sbjct: 95 EIAEQAKHEAEIETRIAELRKEGFWSLKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSLNQPLTSSKAGSSP 264
The following BLAST results are available for this feature:
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