TCONS_00057216-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057216-protein
Unique NameTCONS_00057216-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1259

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057216-protein ID=TCONS_00057216-protein|Name=TCONS_00057216-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1259bp
MVFWLISNGANVHAKTVGEDQAPIHYAAKYNAEDSLKVLLHMGANIEDKD
YKNRTPLFVAAETGRSGACTFLLEQGAPAGVYDNGGRLALSLMVQKMPDV
AKIALGQFVTVDKALRKKYYYLNYLETDTWSRLKSPNYDNQSNSRDSNNN
GGSLKKTRKKSRKKNQRDYSMSDAADLNMIALEKMVHRKYEPLPSSSTTL
ARGPLETICEYNEAELIMNPVILRLIAIKWQLYGNYRTGLSTAINLLYTI
LWTALGITMPRDDVTAYYSPLSDNIWRICLEVISLILAVYFIVKQVVEVQ
RSETRERKYKEWKKRELERDLMYCHERWPEEHRYLTSEINLIETSSKRFM
KNGWNGFEMFTNLIMAMVIITRVVAVTLSNPTLNTIHYKSVPMLLILLWL
RFMRYCQIYQSLGPFITMLSHVIGDTLKFGFLFFEFFIPYVCAFWILFGG
QPGTEYERFNDVIYQVFLMTLVDEYEREELMKQDKVMAQVLVGTYLAIAS
VVCLNLYIALMSQTFTRIYQNATATAYMQQAKHLLTIERSLSKRKRTKVQ
RFMANECSPQVVYDNGVNDDDEDDNVRFSLYRLVNSVNEIKDKMGIVMVE
SATSTHHVNANTKISGGIGSSGDDIVRSSLHSTNVTSLQEQQKIRTRMDS
LEETTEEMNTKIDEVHSLLKTINESFRNNIESNKNNPKMIEFAALPNERG
AEAPESKSTKDEKEKRNSWDQKLMSVIAAFTNKDKQATTALDSGHSQVYQ
TQPHPGEALMDRRQHLHTPFTRHPADNSFSTLPRNYQRSHHYPEDISAPS
SEYSPYHPMTVPRKFSSLHDVSYQQQRSSPHLMSPTNAPHLQSGREGSPY
PSQFHQEPQHHPTLTKMRSMPAGGSYEDHLHPQQFTREGYYTTSPLAPKY
RNFINQEAQYYEHSSPARPSSARDFLERRDRELTKPNHLGSASATLPRKS
YRKKSKSPKSSSRESKSPIRRHHYQHENLNLDSPDKRRQHQEKEDSKLNS
TERTRLRLYQDQEDKSKRQIYLEVKKKKRHQQSIEASSSENESSDPSSSS
ELESPESPSSRENTGRVSIALEKEGLTRNQESSASRIRRDKDDDYNIGFE
KLSDDTRQTNNETSESPSKRKKQDKEKKKVDRKARSSAKISESDIATVSQ
LLSEHGFQSNSLRDNLDNVKKGQSNGEKGRLETMVEPKNQRTTIPSDRKT
SKVECSNIETKKYDTTSRQIKDSTKNFDSSKTSIDFKQEQKTVVLPEKFI
LDGLKDTNV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036047XLOC_036047Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057216TCONS_00057216Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR005821Ion_trans_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 19..48
e-value: 0.064
score: 22.4
coord: 52..83
e-value: 39.0
score: 13.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 19..51
score: 11.14
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 52..84
score: 9.511
NoneNo IPR availableGENE3D1.10.287.70coord: 239..520
e-value: 5.4E-9
score: 35.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 932..1204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 769..880
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..719
NoneNo IPR availableCDDcd00204ANKcoord: 1..103
e-value: 3.79649E-17
score: 78.9646
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 1..177
e-value: 3.9E-20
score: 71.2
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..77
e-value: 1.3E-9
score: 38.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..95
score: 23.286
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 2..94
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 339..522
e-value: 1.4E-12
score: 47.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057216-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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