TCONS_00057224-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057224-protein
Unique Name	TCONS_00057224-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	287

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057224-protein ID=TCONS_00057224-protein|Name=TCONS_00057224-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
MFARATFTDPGVYPRAPESEDEENDLRQPLYRNIEIKGITVKMKWCETCR
FYRPPRCSHCSVCNNCVEVFDHHCPWVDNCIGKKNYRYFFFFVTSLSLHI
LTVIAFTILFVVKKKGEGEGMVQILPAIIILAIAGLASFPVLGLSIFHIG
LVALGRTTNEQVTGKFGSGHNPFDLGCYQNCCTALFGPLPPRYLGYKMPK
RKKKKKGSPYGGDEETVHNGEPLHTQHIRIEMEPIAAGGDSISDTKKLRP
SMKGGGWTGIQTTETSSLSSARSNNPKRVVTSYEVTV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036050	XLOC_036050	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057224	TCONS_00057224	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001594	Palmitoyltrfase_DHHC

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001594	Palmitoyltransferase, DHHC domain	PFAM	PF01529	DHHC	coord: 42..163 e-value: 1.3E-35 score: 122.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..222
None	No IPR available	PROSITE	PS50216	DHHC	coord: 44..94 score: 27.14

Blast

[Close]

BLAST of TCONS_00057224-protein vs. Swiss-Prot (Human)
Match: ZDHC5 (Palmitoyltransferase ZDHHC5 OS=Homo sapiens GN=ZDHHC5 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 4.619e-75
Identity = 119/202 (58.91%), Postives = 146/202 (72.28%), Query Frame = 0

Query:    2 FARATFTDPGVYPRAPESEDEENDLRQPLYRNIEIKGITVKMKWCETCRFYRPPRCSHCSVCNNCVEVFDHHCPWVDNCIGKKNYRYFFFFVTSLSLHILTVIAFTILFVVKKKGEGEGMVQILPAIIILAIAGLASFPVLGLSIFHIGLVALGRTTNEQVTGKFGSGHNPFDLGCYQNCCTALFGPLPPRYLGYKMPKRKK 203
            F+ ATF DPG++PRA E ED+E+D R PLY+ +EIKGI V+MKWC TCRFYRPPRCSHCSVC+NCVE FDHHCPWV+NCIG++NYRYFF F+ SL+ HI+ V  F +L+V+    E  G V+    + ++ +AGL   PV GL+ FH+ LVA GRTTNEQVTGKF  G NPF  GC  N    L     PRYLG   PK++K
Sbjct:   62 FSMATFMDPGIFPRAEEDEDKEDDFRAPLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLYHIEELSG-VRTAVTMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFRGGVNPFTNGCCNNVSRVLCSSPAPRYLG--RPKKEK 260

The following BLAST results are available for this feature:

BLAST of TCONS_00057224-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057224-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZDHC5	4.619e-75	58.91	Palmitoyltransferase ZDHHC5 OS=Homo sapiens GN=ZDH...	[more]

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TCONS_00057224-protein (polypeptide) - C. hemisphaerica