TCONS_00057237-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057237-protein
Unique Name	TCONS_00057237-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	582

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057237-protein ID=TCONS_00057237-protein|Name=TCONS_00057237-protein|organism=Clytia hemisphaerica|type=polypeptide|length=582bp
MHERNIFKNDKPNFEQLAQEYPEFTPYLHKGSSGKPYVNFKDPAALRALS
VVLLKKFFDLNLEIPLDRLIPTIPLRLNYLHWIEDLLNLNETEECSDEVL
GIDVGCGASCIYGLLGNKMNQWKFIATDVDETSCKYAQQNVEQNHMQHQI
TIQHKRENESFFESVLSQHPQSQTKLFHFTMCNPPFFAEVYDGHVTYNRT
NHRPSLASTSTATESERATEGGEVSFVERMIDESLRTKNAIRWYTTMLGK
KSSMKPLIQRLKDAEITNYTTTEFSQGRTTRWGLAWSFSDNRPPSKLLEK
PSKKKKKAKPFIMSFTRDFFVETEILNIKSTAKSTEIDAVVWDIVKVVEK
ELFDLQISLDAPEHIELMNSGAYELTGKAFANTWIHSRQKRRKEKRLELV
QDGTTICETQDGTNSCETQDGTTSCEIKPNNQDGNSISSLNQASASFANN
SNHPNQDGTQSYGKRTLDSISFENESEIRNPKKLKMDDEDSVNKYTNKEH
ETNTNELKMEKISTELTMLETNIVECPLFTFSCTASTAKQLHATGGRIPA
LSMLCLEGDREQFHQLFLHLKNKLHGVQISPL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036057	XLOC_036057	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057237	TCONS_00057237	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010286	rRNA_lsu_MeTfrase_F-like
IPR017182	METTL16
IPR029063	SAM-dependent_MTases

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008168	methyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010286	Ribosomal RNA large subunit methyltransferase F-like	PFAM	PF05971	Methyltransf_10	coord: 1..290 e-value: 1.7E-79 score: 267.2
None	No IPR available	GENE3D	3.40.50.150		coord: 32..290 e-value: 6.7E-50 score: 169.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..220
IPR017182	Methyltransferase-like protein 16	PIRSF	PIRSF037350	Mtase_ZK1128	coord: 1..526 e-value: 2.0E-123 score: 410.6
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 38..289

Blast

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BLAST of TCONS_00057237-protein vs. Swiss-Prot (Human)
Match: MET16 (U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase OS=Homo sapiens GN=METTL16 PE=1 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 2.292e-90
Identity = 161/404 (39.85%), Postives = 239/404 (59.16%), Query Frame = 0

Query:    1 MHERNIFKNDKPNFEQLAQEYPEFTPYLHKGSSGKPYVNFKDPAALRALSVVLLKKFFDLNLEIPLDRLIPTIPLRLNYLHWIEDLLNLNETEECSDEVLGIDVGCGASCIYGLLGNKMNQWKFIATDVDETSCKYAQQNVEQNHMQHQITIQHKRENESFFESVLSQHPQSQTKLFHFTMCNPPFFAEVYDGHVTYNRTNHRPSLASTSTATESERATEGGEVSFVERMIDESLRTKNAIRWYTTMLGKKSSMKPLIQRLKDAEITNYTTTEFSQGRTTRWGLAWSFSDN----RPPSKL--LEKPSKKKKKAKPFIMSFTRDFFVETEILNIKSTAKSTEIDAVVWDIVKVVEKELFDLQISLDAPEHIELMNSGAYELT--GKAFANTWIHSRQKRRKEKR 396
            MH RN +K+  P+F  LA +YP+F  ++    +G+  +NFKDP A+RAL+  LL++ F L+++IPL+RLIPT+PLRLNY+HW+EDL+   ++++ S    GID+G GASCIY LLG  +N W F+AT+VD+    YA++NVEQN++   I +  K   ++     L +  +    ++ F MCNPPFFA   +     +R   RP  +S +T   +E   EGGE+ FV+R+I +SL+ K  +RWY+ MLGKK S+ PL + L+   +   T TEF QGRT RW LAWSF D+     PPSK   LEKP       KP           E   L++K++   +E    +  +   +EK L DL++     +H + +  G  E++    A  N+WIH R+K+R+  R
Sbjct:    7 MHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDK-STLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVV-KVPQKTLLMDALKEESEI---IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKPR------KPITFVVLASVMKE---LSLKASPLRSETAEGIVVVTTWIEKILTDLKV-----QH-KRVPCGKEEVSLFLTAIENSWIHLRRKKRERVR 390

The following BLAST results are available for this feature:

BLAST of TCONS_00057237-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057237-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MET16	2.292e-90	39.85	U6 small nuclear RNA (adenine-(43)-N(6))-methyltra...	[more]

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TCONS_00057237-protein (polypeptide) - C. hemisphaerica