Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00057241-protein ID=TCONS_00057241-protein|Name=TCONS_00057241-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp LWKRSGAWFFNSMPKYTLPEKEEYRYGMMNRGTGSLYDGTDSPMSKGSVY NLHRNDDSESADEASDSDADETQSIKAFALPEDRRSLYSGFMMDDEDAMG ITPRRNAVSGGGEPMPPQKKAASKTSSSESDHNTRTERKFTSQASLLSSD NSSNDERRGSATSLSSTETPRKKLGIRDRVLRKHSKGTEDEDRHSSKFER SPGQLRKTGSIISDVSIPSHNGASTEGSEQDIDALFQDYEKEQANKGVEQ KEYTGSCGMIEFTLQYDQNTQELLVIVHNCKGLKGDKGKTPSLPYVKTYI LPEAQKATKKRTVALKKVADPVYNETLVYYGVSPIDIENKGLKLCVMDEN KNSVIGETSIPMKTLSTRPVQQFRRILDLKSNDSALFLDTKKTLSNPGRI ELALHYLSKQGKLVVGVIRCSGLLAMDPNGYSDPYVKCYLLPDPHKRTKQ KTQVKKKTLNPEFNEEFTYKIPHSELAKRTLHISVWDHDVGRSNDFIGGV TLGIEASGDLLRHWFETLQTQDRRVIKWHTLTETCPIIKE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term Definition
GO:0016020 membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
cellular_component
GO:0016020
membrane
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 450 500 Score = 60.91 Score = 56.06 Score = 48.71 Expect = 1.2E-8 / Score = 44.7 Expect = 5.2E-23 / Score = 92.4 Expect = 9.3E-44 / Score = 148.4 Expect = 1.6E-21 / Score = 76.0 Expect = 2.5E-11 / Score = 43.7 Expect = 3.5E-26 / Score = 91.4 Score = 19.159 Score = 11.759 Score = Score = Score = 36.76 Score = 39.71 Score = 42.1 Score = 50.8 Score = Score = Sequence PR00360 SM00239 G3DSA:2.60.40.150 G3DSA:2.60.40.150 PF00168 PS50004 PS50004 SSF49562 SSF49562 PR00399 mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
IPR000008 C2 domain PRINTS PR00360 C2DOMAIN coord: 428..440 score: 60.91 coord: 457..470 score: 56.06 coord: 481..489 score: 48.71
IPR000008 C2 domain SMART SM00239 C2_3c coord: 272..374 e-value: 1.2E-8 score: 44.7 coord: 412..526 e-value: 5.2E-23 score: 92.4
IPR000008 C2 domain GENE3D 2.60.40.150 coord: 388..539 e-value: 9.3E-44 score: 148.4
IPR000008 C2 domain GENE3D 2.60.40.150 coord: 255..383 e-value: 1.6E-21 score: 76.0
IPR000008 C2 domain PFAM PF00168 C2 coord: 411..516 e-value: 3.5E-26 score: 91.4 coord: 273..368 e-value: 2.5E-11 score: 43.7
IPR000008 C2 domain PROSITE PS50004 C2 coord: 412..501 score: 19.159
IPR000008 C2 domain PROSITE PS50004 C2 coord: 272..359 score: 11.759
IPR000008 C2 domain SUPERFAMILY 49562 C2 domain (Calcium/lipid-binding domain, CaLB) coord: 250..373
IPR000008 C2 domain SUPERFAMILY 49562 C2 domain (Calcium/lipid-binding domain, CaLB) coord: 394..519
IPR001565 Synaptotagmin PRINTS PR00399 SYNAPTOTAGMN coord: 472..487 score: 42.1 coord: 492..502 score: 50.8 coord: 400..415 score: 36.76 coord: 415..428 score: 39.71
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 35..75
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 98..228
Blast
BLAST of TCONS_00057241-protein vs. Swiss-Prot (Human)
Match:
DOC2B (Double C2-like domain-containing protein beta OS=Homo sapiens GN=DOC2B PE=1 SV=1)
HSP 1 Score: 272.707 bits (696), Expect = 2.730e-86
Identity = 147/333 (44.14%), Postives = 201/333 (60.36%), Query Frame = 0
Query: 229 EQDIDALFQDY--------------------EKEQANKGVEQKEYTGSCGMIEFTLQYDQNTQELLVIVHNCKGLKGDKGKTPSLPYVKTYILPEAQKATKKRTVALKKVADPVYNETLVYYGVSPIDIENKGLKLCVMDENK---NSVIGETSIPMKTLSTRPVQQFRRILDLKSNDSALFLDTK--KTLSNPGRIELALHYLSKQGKLVVGVIRCSGLLAMDPNGYSDPYVKCYLLPDPHKRTKQKTQVKKKTLNPEFNEEFTYKIPHSELAKRTLHISVWDHDVGRSNDFIGGVTLGIEASGDLLRHWFETLQTQDRRVIKWHTLTETCP 536
++D+D LF Y E E G E + T + G ++F+L YDQ L + KGLK + PYVK ++LP A KA K RT L+ +P +NETL YYG++ D+ K L++ V DE+K N IGET +P+K L + F L+ L +D K+L GRI ++L Y S++ L+VG++RC+ L AMD NGYSDPYVK YL PD K++K KT VKKKTLNPEFNEEF Y+I H +LAK++L ++VWD+D+G+SNDFIGGV LGI A G+ L+HWF+ L+ +D+R+ +WHTLT P
Sbjct: 80 DEDVDQLFGAYGSSPGPSPGPSPARPPAKPPEDEPDADGYESDDCT-ALGTLDFSLLYDQENNALHCTITKAKGLKPMDHNGLADPYVKLHLLPGASKANKLRTKTLRNTLNPTWNETLTYYGITDEDMIRKTLRISVCDEDKFRHNEFIGETRVPLKKLKPNHTKTFNICLE-----KQLPVDKTEDKSLEERGRILISLKYSSQKQGLLVGIVRCAHLAAMDANGYSDPYVKTYLRPDVDKKSKHKTAVKKKTLNPEFNEEFCYEIKHGDLAKKSLEVTVWDYDIGKSNDFIGGVVLGIHAKGERLKHWFDCLKNKDKRIERWHTLTSELP 406
The following BLAST results are available for this feature:
BLAST of TCONS_00057241-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
L W K R S G A W F F N S M P K Y T L P E K E E Y R Y G M M N R G T G S L Y D G T D S P M S K G S V Y N L H R N D D S E S A D E A S D S D A D E T Q S I K A F A L P E D R R S L Y S G F M M D D E D A M G I T P R R N A V S G G G E P M P P Q K K A A S K T S S S E S D H N T R T E R K F T S Q A S L L S S D N S S N D E R R G S A T S L S S T E T P R K K L G I R D R V L R K H S K G T E D E D R H S S K F E R S P G Q L R K T G S I I S D V S I P S H N G A S T E G S E Q D I D A L F Q D Y E K E Q A N K G V E Q K E Y T G S C G M I E F T L Q Y D Q N T Q E L L V I V H N C K G L K G D K G K T P S L P Y V K T Y I L P E A Q K A T K K R T V A L K K V A D P V Y N E T L V Y Y G V S P I D I E N K G L K L C V M D E N K N S V I G E T S I P M K T L S T R P V Q Q F R R I L D L K S N D S A L F L D T K K T L S N P G R I E L A L H Y L S K Q G K L V V G V I R C S G L L A M D P N G Y S D P Y V K C Y L L P D P H K R T K Q K T Q V K K K T L N P E F N E E F T Y K I P H S E L A K R T L H I S V W D H D V G R S N D F I G G V T L G I E A S G D L L R H W F E T L Q T Q D R R V I K W H T L T E T C P I I K E 50 100 150 200 250 300 350 400 450 500 Expect = 2.73e-86 / Id = 44.14 Sequence DOC2B
Match Name E-value Identity Description
DOC2B 2.730e-86 44.14 Double C2-like domain-containing protein beta OS=H... [more]
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