TCONS_00057379-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057379-protein
Unique NameTCONS_00057379-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length174

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057379-protein ID=TCONS_00057379-protein|Name=TCONS_00057379-protein|organism=Clytia hemisphaerica|type=polypeptide|length=174bp
MATKNLTRLYFKFRDNHKTQQQRDTPKKDLFKARAKNEESISLINDEDNE
DDGLGGSNFSSLPPEWTTAVEEVQYDISKIMKRMKDLSSLHNKHLNRPSM
DDNMTEEHTIDVTTQEITQLFHQCQRCIQSIQGRSMGCQKAERQIIKNVV
SSLASQLQDLSFNFKKDQSKYLKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036150XLOC_036150Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057379TCONS_00057379Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.70coord: 62..174
e-value: 1.5E-22
score: 80.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..62
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 62..174

Blast
[Close]
BLAST of TCONS_00057379-protein vs. Swiss-Prot (Human)
Match: STX16 (Syntaxin-16 OS=Homo sapiens GN=STX16 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 6.685e-44
Identity = 61/112 (54.46%), Postives = 89/112 (79.46%), Query Frame = 0 
Query:   63 PPEWTTAVEEVQYDISKIMKRMKDLSSLHNKHLNRPSMDDNMTEEHTIDVTTQEITQLFHQCQRCIQSIQGRSMGCQKAERQIIKNVVSSLASQLQDLSFNFKKDQSKYLKR 174
            PP+W   V+E+QYD+ +I ++MK+L+SLH+KHLNRP++DD+  EEH I++TTQEITQLFH+CQR +Q++  R+  C + E +++ NVV+SLA  LQ+LS +F+  QS YLKR
Sbjct:   75 PPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQSGYLKR 186
The following BLAST results are available for this feature:
BLAST of TCONS_00057379-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STX166.685e-4454.46Syntaxin-16 OS=Homo sapiens GN=STX16 PE=1 SV=3[more]
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