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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00057395-protein ID=TCONS_00057395-protein|Name=TCONS_00057395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=767bp MQENYREIQENLLDSVEMEENIDSKYEFNAPKYIDFLQGDVDEDADRWFD ERDGDEGGIDIDMVEYYEEAMQANGGFQSATSAITAALQENQEPVNSENK PATTTEQTTEHQDVSMMDTDMPEENTTHPEKADIPQQQQTESEMAVQEPK PEVRTEPIIMHEVIEQKVDQVNEQQPSASDNPSSLQSVKPAAKPVIKPRK SNIRTSWNSPHVGSDGEFAKRSLARRSCNNKPINYSETKKRKKTLSEDVQ VLPKKHKPEVKLTTSETPQFVRKLRERGIKRGPSSEAIQLKQIRQLQKQT RENVKKNEKRMNKAIKAGPYVPLKCSEEVTHPVAFSFESDKRVKSNHGTH TRSNSESKTFQNQLRKHPPSPTFNKKAPTKPKPFHFTLPDKEAPKQKWES MAQFAMNYQTKTPERFRAKPKAQEGNKSMDGDKKHAKPQLTQAKTPMLMT KKRSRPVTQESTQQIEEKTVDEMKKYKFKANDFDRRIVEKQGMFGVKKIP EVKKTSVKPFSFEIEKRIENRKQKEEPDVPPTCKPTKTNTSLNGGGKPDQ PRPRKTEVKPFSFEIRDKQRYTKKEEKIKDFITQEEKMHEFHARPLPSFS PDQLPAVRTKESTLPEPFHISSGSMAYKQKFTQQAQEKEQDEKTKREFKA SESVTTKREPFKPLQGLIPPTNVKNVQLNSDIRAKERAKFDEWKSEQERA MEEEKLRFQKEKELQEMEAIKQLRKDAIPKANPVPHFKNFDIHKSEKPLT EPHTPHFECKKRALSRM Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 290..310 |
None | No IPR available | COILS | Coil | Coil | coord: 683..714 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 90..247 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 294..315 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 337..392 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 629..672 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 745..767 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 518..566 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 409..468 |
IPR027330 | TPX2 central domain | PFAM | PF12214 | TPX2_importin | coord: 439..598 e-value: 1.7E-15 score: 57.5 |
IPR027329 | TPX2, C-terminal | PFAM | PF06886 | TPX2 | coord: 678..734 e-value: 1.8E-13 score: 50.4 |
Blast
BLAST of TCONS_00057395-protein vs. Swiss-Prot (Human)
Match: TPX2 (Targeting protein for Xklp2 OS=Homo sapiens GN=TPX2 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.850e-19 Identity = 76/223 (34.08%), Postives = 124/223 (55.61%), Query Frame = 0 Query: 547 KPDQPRPRKTEVKPFSFEIRDKQRYTKKEEKIKDFITQEEKMHEFHARPLPSFSPDQLPAVRTKESTLPEPFHISS---GSMAYKQKFTQQAQEKEQDEKTKREFKASESVTTKREPFKP-------LQGLIPPTNVKNVQLNSDIRAKERAKFDEWKSEQE--RAMEEEKLRFQKEKELQEMEAIKQLRKDAIPKANPVPHFKNFDIHKSEKPLTEPHTPHF 757
KP P R E+ PFSF+ RDK+R +KE+KIK+ Q+ ++ +F A PLP F LP + K T EPF + + G++ Q + Q +E+ + +K FKA + +EPF P +GL + QL ++ RAKER + ++ +E E +A + E+ R Q+E++ +E A +LR++ + KANP+ ++ +I S++PLT P +P F
Sbjct: 524 KPQIPEARTVEICPFSFDSRDKERQLQKEKKIKEL--QKGEVPKFKALPLPHFDTINLPEKKVKNVTQIEPFCLETDRRGALKA-QTWKHQLEEELRQQKEAACFKARPNTVISQEPFVPKKEKKSVAEGLSGSLVQEPFQLATEKRAKERQELEKRMAEVEAQKAQQLEEARLQEEEQKKEELA--RLRRELVHKANPIRKYQGLEIKSSDQPLTVPVSPKF 741
The following BLAST results are available for this feature:
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