TCONS_00057457-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057457-protein
Unique NameTCONS_00057457-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length524

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057457-protein ID=TCONS_00057457-protein|Name=TCONS_00057457-protein|organism=Clytia hemisphaerica|type=polypeptide|length=524bp
MRCIIFLYILLPAVLSVDLHYKNLADYAKKWQKGRSKPIKCTVHLIGWNN
NPPYFYQSDVPGDSEHDKEIWITTTGIIPEILTRILHKTEHWSKEKLNVK
YAYEIQNETFSFTTEQELIDLVSNRDVKRPLNTFNVSASSNEVFILAGTT
FYTENEKLYKRMKIVTTENSVIIVRTKDILLLHRFFNGIWKCKGVIFFAV
TCAVNLAAVIWVIERQSNMGFEKTFGAGLWTSFWYCFVTMTTVGYGDKVP
KHFISRFLCLAWMLFGLMLTAIITTTIMEAVQEEFPKVGKRIAVKNDSTQ
QAVLTTKISAFPVPYQTAEEVLEAVRREEVDAGFLDSPIAAYLFKEHKIE
DLKIESRFLVKSWVFGYVFQAVWDECSAFFLNQTLPEDTMSSYKSIFVPT
YHIKHYYARDFLEFFITSNDEGLVYYMTIFAAILIFLGVLTELLIKLNNW
YQVRQQYGGNCMTATMIRRQRLRSDRESLLQKEAEDEIMKELETEVFDKI
QELKERLMQVNNHEQIIIGKETQA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036209XLOC_036209Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057457TCONS_00057457Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001320Iontro_rcpt
IPR013099K_chnl_dom
IPR001638Solute-binding_3/MltF_N
Vocabulary: Molecular Function
TermDefinition
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 200..275
e-value: 1.2E-7
score: 31.6
NoneNo IPR availableGENE3D3.40.190.10coord: 286..362
e-value: 1.5E-9
score: 37.5
NoneNo IPR availableGENE3D1.10.287.70coord: 178..285
e-value: 3.8E-20
score: 71.0
NoneNo IPR availableCDDcd00134PBPbcoord: 289..354
e-value: 7.68911E-8
score: 50.8346
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 181..283
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 46..161
coord: 282..367
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 213..282
e-value: 5.8E-13
score: 48.5
IPR001638Solute-binding protein family 3/N-terminal domain of MltFPFAMPF00497SBP_bac_3coord: 147..354
e-value: 3.5E-9
score: 36.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057457-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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