TCONS_00057602-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057602-protein
Unique NameTCONS_00057602-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length238

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057602-protein ID=TCONS_00057602-protein|Name=TCONS_00057602-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
NSETLKVINSLNDSKSVSGDIPTKIIKLAKFVCAPTLTSCFNHSLETQHF
PDSLKQADIIPVHKKKSKHDKDNYRPVSLLPSPAKIFEKLISKQLNIFLE
SLFSTKLCGFRKQYSTQSALLNMLRKWQMSLSNSEKIGAILMDLSKAFDC
LPHDLLIAKLHAYGLGNKSLAFIHSYLSNRKHRVRVGSSYSSWLPLLFGV
PQGSILGPILFNVFINDLFYFVNEDDLCNFADDNTLHK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036328XLOC_036328Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057602TCONS_00057602Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
20406080100120140160180200220Expect = 3.8E-16 / Score = 58.7Score = Expect = 2.7E-33 / Score = 115.3Score = 21.032SequenceG3DSA:3.30.70.270SSF56672PF00078PS50878
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 108..237
e-value: 3.8E-16
score: 58.7
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 63..235
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 67..236
e-value: 2.7E-33
score: 115.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 43..238
score: 21.032

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057602-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
20406080100120140160180200220Sequence
Match NameE-valueIdentityDescription
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