TCONS_00057661-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057661-protein
Unique Name	TCONS_00057661-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2300

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057661-protein ID=TCONS_00057661-protein|Name=TCONS_00057661-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2300bp
QYIQNFYHEDPNAYKNEIQTISNMRKGIGNIPYDIQGCKTLRKYFTQLYY
LQSRFPMLDGGEAAVPFIWFDVYSGEPVMYKDIRYEQACVLFNIGALYSH
LAVREQRQTDESLKTAVQHFQSAAGAFQYLKDNYLLSECIDMTEDVLSLK
IKIMLGQAVECILEKSILENKNPTTIARIAAQIVDTFNECINLFSKSGTS
EMDPDVKKMWMKSLKVKIKSYETISYVYMSNDADHKEKYGEKVTYLKAAS
DKIAEALKLSKSQTNETVNFIADVVQVKYEDAKKNNDFIYHMKIPDISEM
DQIKGVDIVKPVPFLYNDKDVAGPDIFQRLVPMKAHEASSLYSDKKDTLL
RSLVNEVEEKDVSLSQYLTAMKIEELLDPKENKLPDDLQDKNKFLQSNPD
LIPKAEKLVEELAGLSSELDGLIKDSKVILDQEMRIDAQENSGREMGTLR
EYDKKLTQCRDTHGEAQTVNMKLVQTIIEKKSMIEFLSGDPKNILASLPS
LHVVDDSIDDALVQRIREILGKVDKMRTQRQSLMQTLRTEFDKDDVTAQL
VVLKDGGNRQAFFDEQIKKHDKNIAYLRQNLSAQDNIIQALTEANAKYAV
TREKELGCKGEFDREVNRYMNDIKLFLAFQDRIRSSGIPFFKELQKEVNA
LHQKIVEFSNDRKKKRPSKSVANVAPAPSRPTARKPPLMGATSPTQIPNI
NPITAIRPPFIPGANPTVGPHGALQRPPPQMNPNQLPGQPFRPQNPNLPL
QNIANIRPNMTIGPGGGLQPQNMPPNRFPSQGHQPRLPHTGSQSGMPPVG
SSGNRMLVAPQGPPSIPPQGSIRPMIPPNALRQSSTGPLTPQSNIRPPMG
PQVPQPIIRPQQPGSPQIMGQQPIFPQGGVRHPTSQAGAPSPQHQGLVRP
VTNDWQHIRQPGPGVDQRFPQPHQSQIRGGFPPRVGGPLPQQRPMVPQMR
PLQPQTGPQNPRMNQPQNTYQQQRPMNPQHSNLTPQQRPPLTPNTLLNDF
VPPSMSNNLPQPLMPEKNNQPQDIFTNNPQQHHSQMQRQSSRQDNLQQIQ
PMNPQQFSQQNSQQFSQQNFLQNQQPSLQNQQHFQPQNQSQQMQSPNQLI
RSQQQQPQQQQPQQQQPQQQQPQQQSRHAQPMPIPSQQQIRPTINQQPQE
QKNIFPPPQSQQQFHNTPPMSPYMSTSQPQSMQQYQNSQPNSMQNFSNPQ
LTSMDRIQISQPNSIQTISNPQLASLSNMQIPQQKSIQNLPTSRPIVPQN
QQSFSGNNITPIQIPNSMATSMLDSPELVTPRANQNIPTAFQQPMMFQQQ
QIRPIRSQSDQAQPIRNQGIQGIKPINNQPSQIQAIRSQPEQIKPIMSQH
GQIQPINSQPSQIQPIRNQQIIPQSPSAPPIAPSVPDFPITPQPYPGPSG
ISMVPPGSLLTGKPLMASSQHDTIISNILNKQTQQQPATNYQSEINTLSM
QQMQLQQTMMLQQQQHQQMLAAMLQTQNQKVDKSEEEAKIHNLESQLASI
KDLLKLQQESTKQDTEKHRMEQEILALKQQLAQKDTLKTSPSVATTLNTT
LTTLMQPLQGTKETSTIGTSPRPPADVDRQSPDVILPRALESSVDNISTN
SSLNTTNESTPNFSLATTVENDKIPFYEPKLDQKVKQPIKQESKDSENEY
IVPRKLSQEIKSSPEMISPPTQPSLKREESSDTEYIVPRTPDSLSPKDEQ
TKNLITDGINNIKRTLKRDSESSENDLIVPRTQEVQPPSKDVEIKPSTIT
TQGPTSPIIIPATPTSETLPISPSSHDDVIRPRQPFADSNVDSKTKNDNS
TSSTPTLDSVKRVIPKDLNENPNNRFSPINSPSMMKKFGDQHPIVRQSPR
GGNSPITSVRSSPRGGNSPNTSAKSSLRSSPILCANGQGVQLDDLEGVID
HRHLARQLGRLSFYVGEPDEKQWRKYIGELSIQVEKFNNHCKSLCKPQAN
SYIDGFKIIWEDLAKQEQMDIKSFSAIAGEKNTSKNRYRDILPWDHSRVK
LNTSSDDYINATHINELTPRSPSFIATQGPIPQTFEDFWRMVWEQNSSII
VMLTKEIEGTKLKCHPYWTRSASSTTSSGSKAEFGHMLVEVFEEKECSAW
KVRSIRLNNNKEKETRYIRHFQFTSWPDYGTPESPYELLSFMAEVYAGQQ
MYDPAAQNPMILHCSAGVGRTGSFCCIYSAIREMEGQNGLIEIPGVIRKL
RQSRQHMVQRMEQMIFCFQAVCCFAQQFIDTEKSKLVDRSRAASLQSSTS
FDDAAFSSSPRGSKVGTNLVPMAMLDNQSELSISGTLNDSFDPKETSENS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036369	XLOC_036369	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057661	TCONS_00057661	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000242	PTPase_domain
IPR004328	BRO1_dom
IPR003595	Tyr_Pase_cat
IPR025304	ALIX_V_dom
IPR029021	Prot-tyrosine_phosphatase-like
IPR016130	Tyr_Pase_AS
IPR000387	TYR_PHOSPHATASE_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006470	protein dephosphorylation
GO:0016311	dephosphorylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0004725	protein tyrosine phosphatase activity
GO:0005515	protein binding
GO:0016791	phosphatase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0006470	protein dephosphorylation
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004725	protein tyrosine phosphatase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 405..425
None	No IPR available	COILS	Coil	Coil	coord: 1474..1537
None	No IPR available	COILS	Coil	Coil	coord: 641..661
None	No IPR available	GENE3D	1.20.120.560		coord: 331..603 e-value: 6.4E-34 score: 117.1
None	No IPR available	GENE3D	1.25.40.280		coord: 1..330 e-value: 6.8E-95 score: 317.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1076..1199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 758..1046
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1634..1700
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1715..1880
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 716..742
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 659..699
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1557..1582
None	No IPR available	CDD	cd00047	PTPc	coord: 1985..2221 e-value: 9.14786E-91 score: 296.034
IPR000242	PTP type protein phosphatase	PRINTS	PR00700	PRTYPHPHTASE	coord: 2007..2014 score: 66.03 coord: 2024..2044 score: 64.9 coord: 2116..2133 score: 49.58 coord: 2191..2206 score: 24.26 coord: 2159..2177 score: 61.64 coord: 2207..2217 score: 47.75
IPR000242	PTP type protein phosphatase	SMART	SM00194	PTPc_3	coord: 1955..2226 e-value: 1.8E-94 score: 329.8
IPR000242	PTP type protein phosphatase	PFAM	PF00102	Y_phosphatase	coord: 1982..2221 e-value: 1.4E-70 score: 237.4
IPR000242	PTP type protein phosphatase	PROSITE	PS50055	TYR_PHOSPHATASE_PTP	coord: 1956..2224 score: 48.321
IPR004328	BRO1 domain	SMART	SM01041	BRO1_2	coord: 1..354 e-value: 1.0E-104 score: 363.9
IPR004328	BRO1 domain	PFAM	PF03097	BRO1	coord: 1..350 e-value: 3.3E-107 score: 358.6
IPR004328	BRO1 domain	PROSITE	PS51180	BRO1	coord: 1..364 score: 52.395
IPR003595	Protein-tyrosine phosphatase, catalytic	SMART	SM00404	ptp_7	coord: 2117..2223 e-value: 4.7E-26 score: 102.6
IPR025304	ALIX V-shaped domain	PFAM	PF13949	ALIX_LYPXL_bnd	coord: 384..664 e-value: 9.6E-29 score: 100.5
IPR029021	Protein-tyrosine phosphatase-like	GENE3D	3.90.190.10		coord: 1927..2232 e-value: 7.8E-93 score: 310.4
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 1955..2228
IPR016130	Protein-tyrosine phosphatase, active site	PROSITE	PS00383	TYR_PHOSPHATASE_1	coord: 2162..2172
IPR000387	Tyrosine specific protein phosphatases domain	PROSITE	PS50056	TYR_PHOSPHATASE_2	coord: 2139..2215 score: 16.572

Blast

[Close]

BLAST of TCONS_00057661-protein vs. Swiss-Prot (Human)
Match: PTN23 (Tyrosine-protein phosphatase non-receptor type 23 OS=Homo sapiens GN=PTPN23 PE=1 SV=1)

HSP 1 Score: 468.389 bits (1204), Expect = 6.852e-136
Identity = 247/684 (36.11%), Postives = 408/684 (59.65%), Query Frame = 0

Query:    1 QYIQNFYHEDPNAYKNEIQTISNMRKGIGNIPYDIQGCKTLRKYFTQLYYLQSRFPMLDGGEAAVPFIWFDVYSGEPVMYKDIRYEQACVLFNIGALYSHLAVREQRQTDESLKTAVQHFQSAAGAFQYLKDNYLLSECIDMTEDVLSLKIKIMLGQAVECILEKSILENKNPTTIARIAAQIVDTFNECINLFSKSGTSEMDPDVKKMWMKSLKVKIKSYETISYVYMSNDADHKEKYGEKVTYLKAASDKIAEALKLSKSQ---TNETVNFIADVVQVKYEDAKKNNDFIYHMKIPDISEMDQIKGVDIVKPVPFLYNDKDVAGPDIFQRLVPMKAHEASSLYSDKKDTLLRSLVNEVEEKDVSLSQYLTAMKIE-ELLDPKE--NKLPDDLQDKNKFLQSNPDLIPKAEKLVEELAGLSSELDGLIKDSKVILD---------QEMRIDAQENSGREMGTLREYDKKLTQCRDTHGEAQTVNMKLVQTIIEKKSMIEFLSGDPKNILASLPSLHVVDDSIDDALVQRIREILGKVDKMRTQRQSLMQTLRTEFDKDDVTAQLVVLKDGGNRQAFFDEQIKKHDKNIAYLRQNLSAQDNIIQALTEANAKYAVTREKELGCKGEFDREVNRYMND-IKLFLAFQDRIRSS--GIPFFKELQKEVNALHQKIVEFSNDRKKKR 666
            +++   Y E+P AY  E++ +  +R+    +P D +GC  LRKY  QL+YLQSR PM  G EAAVP  W +++SG+ V ++DI+YEQAC+L+N+GAL+S L   ++R ++E +K +  HFQ AAGAF YL++++  +  +DM+  +L+L + +MLGQA EC+LEKS+L+N+    +ARI+AQ+VD + E         T+ +   ++K W K +++KI  +  +++++M   A+ ++K+GE+V Y ++A DK+ EA+KL+K Q     + + F  DV+  KY  AKK+NDFIYH  +P +  +  +KG  +VKP+P    D  V GPDIF +LVPM AHEASSLYS++K  LLR ++ ++E+K+  L Q++ +M+++ E +D  +  + +P  L +K   L   PD +    + ++ L+G+ ++++  +KD + +L+         QE    A   S      L E  ++  +  + H +A   N +L + +      +  LSG    + A+LP+  +  +  D A++Q ++ IL KV +MR QR SL Q LR    KDD+TA LV   D    +  F+EQ+KK+D+   YL QNL+AQD ++ ALTEAN +YA  R        + D++ N  +   +  + A++D ++ S  G  F+ +L+ +V AL ++       R+  R
Sbjct:   28 KFVLKNYGENPEAYNEELKKLELLRQNAVRVPRDFEGCSVLRKYLGQLHYLQSRVPMGSGQEAAVPVTWTEIFSGKSVAHEDIKYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHFPQAYSVDMSRQILTLNVNLMLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEAIKLAKGQPDTVQDALRFTMDVIGGKYNSAKKDNDFIYHEAVPALDTLQPVKGAPLVKPLPVNPTDPAVTGPDIFAKLVPMAAHEASSLYSEEKAKLLREMMAKIEDKNEVLDQFMDSMQLDPETVDNLDAYSHIPPQLMEKCAALSVRPDTVRNLVQSMQVLSGVFTDVEASLKDIRDLLEEDELLEQKFQEAVGQAGAISITSKAELAEVRREWAKYMEVHEKASFTNSELHRAMNLHVGNLRLLSGPLDQVRAALPTPALSPE--DKAVLQNLKRILAKVQEMRDQRVSLEQQLRELIQKDDITASLVT-TDHSEMKKLFEEQLKKYDQLKVYLEQNLAAQDRVLCALTEANVQYAAVRR----VLSDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADLESKVAALLERTQSTCQAREAAR 704

HSP 2 Score: 206.838 bits (525), Expect = 3.329e-53
Identity = 97/277 (35.02%), Postives = 154/277 (55.60%), Query Frame = 0

Query: 1953 IDGFKIIWEDLAKQEQMDIKSFSAIAGEKNTSKNRYRDILPWDHSRVKLNTSSDDYINATHINELTPRSPSFIATQGPIPQTFEDFWRMVWEQNSSIIVMLTKEIEGTKLKCHPYWTRSASSTTSSGSKAEFGHMLVEVFEEKECSAWKVRSIRLNNNKEKETRYIRHFQFTSWPDYGTPESPYELLSFMAEVYAGQQMYDPAAQNPMILHCSAGVGRTGSFCCIYSAIREMEGQNGLIEIPGVIRKLRQSRQHMVQRMEQMIFCFQAVCCFAQQFI 2229
            +     +W +L   ++ D +  S       + KNR++D++P+D +RV L +  DDYINA+ +  L+P  P  +ATQ P+P T  DFW MV EQ  S+IVML  E E  K K   Y+       T  G     G + + +   +       R + L    +   R + H  F +WP+ G P+SP  LL F+ EV+A   ++      P+I+HCS+GVGRTG+F  +Y+A++E+E  NG+ E+P ++R++RQ R+HM+Q    + FC++AV    +Q +
Sbjct: 1188 VGALDTVWRELQDAQEHDARGRSIAIARCYSLKNRHQDVMPYDSNRVVLRSGKDDYINASCVEGLSPYCPPLVATQAPLPGTAADFWLMVHEQKVSVIVMLVSEAEMEKQKVARYF------PTERGQPMVHGALSLALSSVRSTETHVERVLSLQFRDQSLKRSLVHLHFPTWPELGLPDSPSNLLRFIQEVHA-HYLHQRPLHTPIIVHCSSGVGRTGAFALLYAAVQEVEAGNGIPELPQLVRRMRQQRKHMLQEKLHLRFCYEAVVRHVEQVL 1457

The following BLAST results are available for this feature:

BLAST of TCONS_00057661-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057661-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PTN23	6.852e-136	36.11	Tyrosine-protein phosphatase non-receptor type 23 ...	[more]

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TCONS_00057661-protein (polypeptide) - C. hemisphaerica