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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00058009-protein ID=TCONS_00058009-protein|Name=TCONS_00058009-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp MSLVLPEKFQHILRVMNTNIDGKTKIMYAMTSIKGVGRRFSNICLKKADI DMNKRAGELSDEEVERLITIMQNPRQYKIPDYFLNRKKDIKDGKYSQVSI FNATLIS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term | Definition |
IPR001892 | Ribosomal_S13 |
IPR010979 | Ribosomal_S13-like_H2TH |
Vocabulary: Biological Process
Term | Definition |
GO:0006412 | translation |
Vocabulary: Molecular Function
Term | Definition |
GO:0003723 | RNA binding |
GO:0003735 | structural constituent of ribosome |
GO:0003676 | nucleic acid binding |
Vocabulary: Cellular Component
Term | Definition |
GO:0005840 | ribosome |
GO:0005622 | intracellular |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006412 |
translation |
cellular_component |
GO:0005622 |
intracellular |
cellular_component |
GO:0005840 |
ribosome |
molecular_function |
GO:0003676 |
nucleic acid binding |
molecular_function |
GO:0003723 |
RNA binding |
molecular_function |
GO:0003735 |
structural constituent of ribosome |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00058009-protein vs. Swiss-Prot (Human)
Match: RS18 (40S ribosomal protein S18 OS=Homo sapiens GN=RPS18 PE=1 SV=3) HSP 1 Score: 172.555 bits (436), Expect = 6.107e-57 Identity = 75/98 (76.53%), Postives = 94/98 (95.92%), Query Frame = 0 Query: 1 MSLVLPEKFQHILRVMNTNIDGKTKIMYAMTSIKGVGRRFSNICLKKADIDMNKRAGELSDEEVERLITIMQNPRQYKIPDYFLNRKKDIKDGKYSQV 98
MSLV+PEKFQHILRV+NTNIDG+ KI +A+T+IKGVGRR++++ L+KADID+ KRAGEL+++EVER+ITIMQNPRQYKIPD+FLNR+KD+KDGKYSQV
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQV 98
The following BLAST results are available for this feature:
BLAST of TCONS_00058009-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match Name | E-value | Identity | Description | |
RS18 | 6.107e-57 | 76.53 | 40S ribosomal protein S18 OS=Homo sapiens GN=RPS18... | [more] |
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