Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00058261-protein ID=TCONS_00058261-protein|Name=TCONS_00058261-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp MGLTECRQKGIGILLHYETVKIIDIKNKKVGALYRFIQLIIISYVIGYVI VYKKGYQEFDVAISTVTTKLKGTTYVDFGKFNSTLFNGIRIYDPSDYVIP PQETDAVFVMTNMILTPKQSQSNCPEDSKFKDIHCKKDSDCPKMVPVKNG NGVRTGKCVSSDRNSSMTVCEIYGWCPTEVDQLPMPNNNFSDTVPLLDGT KYSTMLVKNQISFPKFRAIRNNIIQFNDSTYLKRCHYNSDTDPLCPIFNL EDIVSSCGDNYTDVAYQGAIYGIIIEWDCNLDHSIDECLPKYQFKRLDDV NSPISPGYNFRYADYYVEEDTRYRVLTKAYGIKFELLVHGKAGKFNVIPL LTNLGAGMALLGIATVWCDFIVMYLLKKRNVYREHKYQRVDDDSQDPKGN VQVDDDENELESDRPEAERLIKP Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR001429 P2X_purnocptor
IPR027309 P2X_extracellular_dom
Vocabulary: Biological Process
Term Definition
GO:0033198 response to ATP
GO:0098655 cation transmembrane transport
Vocabulary: Molecular Function
Term Definition
GO:0001614 purinergic nucleotide receptor activity
GO:0004931 extracellular ATP-gated cation channel activity
Vocabulary: Cellular Component
Term Definition
GO:0005887 integral component of plasma membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0098655
cation transmembrane transport
biological_process
GO:0033198
response to ATP
cellular_component
GO:0005887
integral component of plasma membrane
molecular_function
GO:0004931
extracellular ATP-gated cation channel activity
molecular_function
GO:0001614
purinergic nucleotide receptor activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 Score = 50.72 Score = 57.97 Score = 71.54 Score = 52.46 Expect = 3.2E-132 / Score = 438.9 Expect = 2.8E-138 / Score = 460.9 Expect = 2.9E-145 / Score = 482.0 Expect = 1.5E-20 / Score = 72.4 Score = Expect = 1.8E-99 / Score = 332.2 Sequence PR01307 TIGR00863 PF00864 PIRSF005713 G3DSA:1.10.287.940 mobidb-lite G3DSA:2.60.490.10
IPR Term IPR Description Source Source Term Source Description Alignment
IPR001429 P2X purinoreceptor PRINTS PR01307 P2XRECEPTOR coord: 325..339 score: 52.46 coord: 306..316 score: 71.54 coord: 168..179 score: 57.97 coord: 90..98 score: 50.72
IPR001429 P2X purinoreceptor TIGRFAM TIGR00863 TIGR00863 coord: 10..387 e-value: 3.2E-132 score: 438.9
IPR001429 P2X purinoreceptor PFAM PF00864 P2X_receptor coord: 15..395 e-value: 2.8E-138 score: 460.9
IPR001429 P2X purinoreceptor PIRSF PIRSF005713 P2X_purinoceptor coord: 3..418 e-value: 2.9E-145 score: 482.0
None No IPR available GENE3D 1.10.287.940 coord: 333..377 e-value: 1.5E-20 score: 72.4
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 389..423
IPR027309 P2X purinoreceptor extracellular domain GENE3D 2.60.490.10 coord: 58..332 e-value: 1.8E-99 score: 332.2
Blast
BLAST of TCONS_00058261-protein vs. Swiss-Prot (Human)
Match:
P2RX4 (P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 SV=2)
HSP 1 Score: 358.607 bits (919), Expect = 1.295e-121
Identity = 183/397 (46.10%), Postives = 252/397 (63.48%), Query Frame = 0
Query: 3 LTECRQKGIGILLHYETVKIIDIKNKKVGALYRFIQLIIISYVIGYVIVYKKGYQEFDVAISTVTTKLKGTTYVDFGKFNSTLFNGIRIYDPSDYVIPPQETDAVFVMTNMILTPKQSQSNCPEDSKFKDIHCKKDSDCPKMVPVKNGNGVRTGKCVSSDRNSSMTVCEIYGWCPTEVD-QLPMPNNNFSDTVPLLDGTKYSTMLVKNQISFPKFRAIRNNIIQFNDSTYLKRCHYNSDTDPLCPIFNLEDIVSSCGDNYTDVAYQGAIYGIIIEWDCNLDHSIDECLPKYQFKRLD--DVNSPISPGYNFRYADYYVE-EDTRYRVLTKAYGIKFELLVHGKAGKFNVIPLLTNLGAGMALLGIATVWCDFIVMYLLKKRNVYREHKYQRVDDDSQ 395
+ C L Y+T +I+ I+++KVG + R +QL+I++YVIG+V V++KGYQE D +S+VTTK+KG + K G RI+D +DYVIP QE +++FVMTN+ILT Q+Q CPE + CK D+ C + NGV TG+CV+ N S+ CE+ WCP E D +P P L + T+LVKN I +PKF + NI+ +TYLK C Y++ TDP CPIF L IV + G ++ D+A +G I GI + WDCNLD + CLP+Y F+RLD DV +SPGYNFR+A YY + R L KAYGI+F+++V GKAGKF++IP + N+G+G+ALLG+ATV CD IV+Y +KKR YRE KY+ V+D Q
Sbjct: 1 MAGCCAALAAFLFEYDTPRIVLIRSRKVGLMNRAVQLLILAYVIGWVFVWEKGYQETDSVVSSVTTKVKGVAVTNTSKL------GFRIWDVADYVIPAQEENSLFVMTNVILTMNQTQGLCPEIPDATTV-CKSDASCTAGSAGTHSNGVSTGRCVAF--NGSVKTCEVAAWCPVEDDTHVPQP--------AFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYDAKTDPFCPIFRLGKIVENAGHSFQDMAVEGGIMGIQVNWDCNLDRAASLCLPRYSFRRLDTRDVEHNVSPGYNFRFAKYYRDLAGNEQRTLIKAYGIRFDIIVFGKAGKFDIIPTMINIGSGLALLGMATVLCDIIVLYCMKKRLYYREKKYKYVEDYEQ 380
The following BLAST results are available for this feature:
BLAST of TCONS_00058261-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M G L T E C R Q K G I G I L L H Y E T V K I I D I K N K K V G A L Y R F I Q L I I I S Y V I G Y V I V Y K K G Y Q E F D V A I S T V T T K L K G T T Y V D F G K F N S T L F N G I R I Y D P S D Y V I P P Q E T D A V F V M T N M I L T P K Q S Q S N C P E D S K F K D I H C K K D S D C P K M V P V K N G N G V R T G K C V S S D R N S S M T V C E I Y G W C P T E V D Q L P M P N N N F S D T V P L L D G T K Y S T M L V K N Q I S F P K F R A I R N N I I Q F N D S T Y L K R C H Y N S D T D P L C P I F N L E D I V S S C G D N Y T D V A Y Q G A I Y G I I I E W D C N L D H S I D E C L P K Y Q F K R L D D V N S P I S P G Y N F R Y A D Y Y V E E D T R Y R V L T K A Y G I K F E L L V H G K A G K F N V I P L L T N L G A G M A L L G I A T V W C D F I V M Y L L K K R N V Y R E H K Y Q R V D D D S Q D P K G N V Q V D D D E N E L E S D R P E A E R L I K P 50 100 150 200 250 300 350 400 Expect = 1.30e-121 / Id = 46.10 Sequence P2RX4
Match Name E-value Identity Description
P2RX4 1.295e-121 46.10 P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 S... [more]
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