TCONS_00058302-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058302-protein
Unique NameTCONS_00058302-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length429

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058302-protein ID=TCONS_00058302-protein|Name=TCONS_00058302-protein|organism=Clytia hemisphaerica|type=polypeptide|length=429bp
LKMNQSRKQMVLEKSKFHCINFLLSYETGKVVEIQNKKVAFWYRLIQLSV
IIYVIGYAIIYDKGYQEIDSAISSTNTKVKGITHVNFGNFPSTFFNGRMI
YDPQDYVIKQDGDSFFVMTNMVITPKQYQGKCPEDPESYRTICKTDKDCQ
QGTSNKYGHGERSGRCVPSDRNSTVKVCESYGWCPTEYDVLPMENYNNFS
KTIPLLDGTKESTVLIKNQIHFPKFKVTRNNIVHNQKKGSYMKRCLHNEE
TDPFCPIFKLRNIVENCGDNYTKVGFKGGIYGIIIKWDCNLDHSIYDCVP
EYKFERLDDEKTPLSHGYNFRYVNYFVENGTRYRTLTKAYGIKFELVVHG
EAGKFSFIPLMLNLGAGIGLLGIATFWCDFIVLNLAKKRNVYRNHICESV
GRGMSSNEKSSLDGDTKQNCDEKKTQEEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036723XLOC_036723Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058302TCONS_00058302Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001429P2X_purnocptor
IPR027309P2X_extracellular_dom
Vocabulary: Biological Process
TermDefinition
GO:0033198response to ATP
GO:0098655cation transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0001614purinergic nucleotide receptor activity
GO:0004931extracellular ATP-gated cation channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098655 cation transmembrane transport
biological_process GO:0033198 response to ATP
cellular_component GO:0005887 integral component of plasma membrane
molecular_function GO:0004931 extracellular ATP-gated cation channel activity
molecular_function GO:0001614 purinergic nucleotide receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001429P2X purinoreceptorPRINTSPR01307P2XRECEPTORcoord: 176..187
score: 58.7
coord: 99..107
score: 43.48
coord: 316..326
score: 52.57
coord: 335..349
score: 54.2
IPR001429P2X purinoreceptorPFAMPF00864P2X_receptorcoord: 24..400
e-value: 7.0E-130
score: 433.2
IPR001429P2X purinoreceptorPIRSFPIRSF005713P2X_purinoceptorcoord: 10..428
e-value: 2.9E-133
score: 442.5
IPR001429P2X purinoreceptorTIGRFAMTIGR00863TIGR00863coord: 18..394
e-value: 4.8E-126
score: 418.5
NoneNo IPR availableGENE3D1.10.287.940coord: 343..387
e-value: 5.0E-19
score: 67.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..429
IPR027309P2X purinoreceptor extracellular domainGENE3D2.60.490.10coord: 67..342
e-value: 3.6E-94
score: 314.8

Blast
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BLAST of TCONS_00058302-protein vs. Swiss-Prot (Human)
Match: P2RX4 (P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 4.357e-108
Identity = 166/377 (44.03%), Postives = 235/377 (62.33%), Query Frame = 0 
Query:   22 FLLSYETGKVVEIQNKKVAFWYRLIQLSVIIYVIGYAIIYDKGYQEIDSAISSTNTKVKGITHVNFGNFPSTFFNGRMIYDPQDYVI-KQDGDSFFVMTNMVITPKQYQGKCPEDPESYRTICKTDKDCQQGTSNKYGHGERSGRCVPSDRNSTVKVCESYGWCPTEYDV-LPMENYNNFSKTIPLLDGTKESTVLIKNQIHFPKFKVTRNNIVHNQKKGSYMKRCLHNEETDPFCPIFKLRNIVENCGDNYTKVGFKGGIYGIIIKWDCNLDHSIYDCVPEYKFERLD--DEKTPLSHGYNFRYVNYFVE-NGTRYRTLTKAYGIKFELVVHGEAGKFSFIPLMLNLGAGIGLLGIATFWCDFIVLNLAKKRNVYR 393
            FL  Y+T ++V I+++KV    R +QL ++ YVIG+  +++KGYQE DS +SS  TKVKG+   N          G  I+D  DYVI  Q+ +S FVMTN+++T  Q QG CPE P++  T+CK+D  C  G++  + +G  +GRCV    N +VK CE   WCP E D  +P   +         L   +  T+L+KN I +PKF  ++ NI+ N    +Y+K C+++ +TDPFCPIF+L  IVEN G ++  +  +GGI GI + WDCNLD +   C+P Y F RLD  D +  +S GYNFR+  Y+ +  G   RTL KAYGI+F+++V G+AGKF  IP M+N+G+G+ LLG+AT  CD IVL   KKR  YR
Sbjct:   11 FLFEYDTPRIVLIRSRKVGLMNRAVQLLILAYVIGWVFVWEKGYQETDSVVSSVTTKVKGVAVTNTSKL------GFRIWDVADYVIPAQEENSLFVMTNVILTMNQTQGLCPEIPDA-TTVCKSDASCTAGSAGTHSNGVSTGRCVAF--NGSVKTCEVAAWCPVEDDTHVPQPAF---------LKAAENFTLLVKNNIWYPKFNFSKRNILPNITT-TYLKSCIYDAKTDPFCPIFRLGKIVENAGHSFQDMAVEGGIMGIQVNWDCNLDRAASLCLPRYSFRRLDTRDVEHNVSPGYNFRFAKYYRDLAGNEQRTLIKAYGIRFDIIVFGKAGKFDIIPTMINIGSGLALLGMATVLCDIIVLYCMKKRLYYR 368
The following BLAST results are available for this feature:
BLAST of TCONS_00058302-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P2RX44.357e-10844.03P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 S... [more]
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