TCONS_00058305-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058305-protein
Unique NameTCONS_00058305-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058305-protein ID=TCONS_00058305-protein|Name=TCONS_00058305-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
MGFEDFKMQDLSALLTYETGKVVEIQNKKVGIWYRSIQIAIIIYVIGYVI
IYDKGYQATDSAISSTNTKVKGITHVDFGNFPSTLFNGRRVYDPEDYVVK
Q
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036724XLOC_036724Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058305TCONS_00058305Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001429P2X_purnocptor
Vocabulary: Biological Process
TermDefinition
GO:0033198response to ATP
GO:0098655cation transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0001614purinergic nucleotide receptor activity
GO:0004931extracellular ATP-gated cation channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098655 cation transmembrane transport
biological_process GO:0033198 response to ATP
cellular_component GO:0005887 integral component of plasma membrane
molecular_function GO:0004931 extracellular ATP-gated cation channel activity
molecular_function GO:0001614 purinergic nucleotide receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..101
NoneNo IPR availableGENE3D1.10.287.940coord: 25..93
e-value: 3.1E-12
score: 45.8
IPR001429P2X purinoreceptorPFAMPF00864P2X_receptorcoord: 15..99
e-value: 7.2E-24
score: 84.4

Blast
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BLAST of TCONS_00058305-protein vs. Swiss-Prot (Human)
Match: P2RX4 (P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 6.244e-18
Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 0 
Query:   14 LLTYETGKVVEIQNKKVGIWYRSIQIAIIIYVIGYVIIYDKGYQATDSAISSTNTKVKGITHVDFGNFPSTLFNGRRVYDPEDYVV 99
            L  Y+T ++V I+++KVG+  R++Q+ I+ YVIG+V +++KGYQ TDS +SS  TKVKG+   +          G R++D  DYV+
Sbjct:   12 LFEYDTPRIVLIRSRKVGLMNRAVQLLILAYVIGWVFVWEKGYQETDSVVSSVTTKVKGVAVTNTSKL------GFRIWDVADYVI 91
The following BLAST results are available for this feature:
BLAST of TCONS_00058305-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P2RX46.244e-1841.86P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 S... [more]
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