TCONS_00058427-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058427-protein
Unique NameTCONS_00058427-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length234

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058427-protein ID=TCONS_00058427-protein|Name=TCONS_00058427-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
MLLRYTKPLLRTATCGCFMTRSALRNVSYIPMVVEQSGRTERSYDIYSRL
LKERIICLFGPINDTVSSLIVAQLLFLQSESSKKPIHMYINSPGGVVTAG
LAIYDTMQYIQPPVATWCVGQACSMGSLLLASGAPGLRHALPHSRIMLHQ
PHGGAQGQATDIEIQAKEILKLKSMLNEIYSKHTGQDVNVIEEKLDRDNF
MSPEEAKTFGVVDHVLNQTPVATDNQDNKDGSEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036815XLOC_036815Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058427TCONS_00058427Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR018215ClpP_Ser_AS
IPR033135ClpP_His_AS
IPR029045ClpP/crotonase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 194..213
score: 48.75
coord: 137..156
score: 57.12
coord: 45..60
score: 56.72
coord: 116..133
score: 59.72
coord: 85..105
score: 64.88
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 29..219
score: 40.292
NoneNo IPR availableGENE3D3.90.226.10coord: 28..220
e-value: 5.9E-44
score: 149.4
NoneNo IPR availableCDDcd07017S14_ClpP_2coord: 45..215
e-value: 4.2761E-114
score: 325.936
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 39..218
e-value: 7.6E-82
score: 273.5
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 116..127
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 138..151
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 37..219

Blast
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BLAST of TCONS_00058427-protein vs. Swiss-Prot (Human)
Match: CLPP (ATP-dependent Clp protease proteolytic subunit, mitochondrial OS=Homo sapiens GN=CLPP PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.989e-105
Identity = 147/228 (64.47%), Postives = 181/228 (79.39%), Query Frame = 0 
Query:    7 KPLLRTATCGCFMTR----SALRNVSYIPMVVEQSGRTERSYDIYSRLLKERIICLFGPINDTVSSLIVAQLLFLQSESSKKPIHMYINSPGGVVTAGLAIYDTMQYIQPPVATWCVGQACSMGSLLLASGAPGLRHALPHSRIMLHQPHGGAQGQATDIEIQAKEILKLKSMLNEIYSKHTGQDVNVIEEKLDRDNFMSPEEAKTFGVVDHVLNQTPVATDNQDNKD 230
            +P  RT   G  + R    +A R +  IP+VVEQ+GR ER+YDIYSRLL+ERI+C+ GPI+D+V+SL++AQLLFLQSES+KKPIHMYINSPGGVVTAGLAIYDTMQYI  P+ TWCVGQA SMGSLLLA+G PG+RH+LP+SRIM+HQP GGA+GQATDI IQA+EI+KLK  L  IY+KHT Q + VIE  ++RD +MSP EA+ FG++D VL   P     QD +D
Sbjct:   32 RPPQRTLQNGLALQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPP-----QDGED 254
The following BLAST results are available for this feature:
BLAST of TCONS_00058427-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLPP1.989e-10564.47ATP-dependent Clp protease proteolytic subunit, mi... [more]
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