TCONS_00058443-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058443-protein
Unique NameTCONS_00058443-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1352

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058443-protein ID=TCONS_00058443-protein|Name=TCONS_00058443-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1352bp
MRLNQDLGKFIQPFQDQRDQLEQKLQHCEMLRKQMVEKDQTAKRHFAQRL
RKFYENKDLLEDCANNILSLWEHKTNLENLHSERLNKPGGYSEIGKKVEQ
QEMLLMQFFYDIKNKIQEMARIFDQNEVDFPSIERLGTDDLPAFVIQLLL
TYFQKLEDSYQQLRELTNHDNIHKSTVLSRSESINQLNKLRRKRTECHQE
IETCKHEQHTLETKLMEKEKMEKRLSGLLVSEDIANIVDALFETKLWSNE
FETTKERFINYFLSVTHVQPSNPRYQSFQQNVRYEIQKISQATAEAHHRC
KNIVDKRGVLEKNMLRIDNEIERIKLDLAKLEEIPRPIYSTQEHELLTEE
CNKTINEEQLAGFGLALSSLENEIEILFKIEKVTRDKQINNTKALNLSFR
RELVRCKRDTTKFNLPVFRKREEILSSLTTHDAVIIVAHTGSGKSTQVPQ
YLADDLHNVLNLKDKFPKIACTQPRRVACMRIAERVAKEYSGAVPIPRSL
QSASTSSKVYGDRRVVAYPLFAKLAMTDQERALDTDDRVGYDRDYKKKED
RSENDHRQESTQERYSDLKGKFGDIGGWVGFHVGSKGKPGDEKKQSRKIS
KDTRICFVTEGLLLQKLKRTNMQTSYDCIILDEAHERGSDTDLLLAHLRD
IVNNNNKANNGENLKIVIMSASINAQAFSMFFNNCPIVNCEGKMHDVSLR
YKPLLNHDADDVDQSIEEFVDANKKRIVKGRSKGEKKGKAVDSLIKHVVN
IIFDDIVTETVEGAPIQRATADGDVLVFLPGQSEIFKCVEEINKRALEEL
KEVNKIHEGKEKRPQKKRKSRNFATQRKFNTKKVVCCTNIAETSLTIPGV
TYVLDSGKAKKMLYNNRLRLATLKMVDISQASAKQRKGRAGRVQPGQCYR
LYSKEHHEETMEAFDEPAMKQMSIDKLYLEAMDVSRGLENIHLMKDAQPD
PESIQNAKERLLNLGFLCKKNQSFFKQEVDISPDGKFALSLMGDVSLEGA
KMVLAAQPYGRVCDTITLAVLLEGNIYTDEETNIERAKYTNNLGDHLTIL
NLYKKFEQKLKSANLETVESWCETMGLDFNSLKQISKSIDQVYKTIKADS
SCSIGSLVKKEETTLRQRSKERTKHLAKKEITNLVSDPKTLMKIVIAGYF
HNICVCNDPEFMIAGYSMITPIANEGEEHQGVHLLKVMLNKNSHLNEPGD
IVKNSTIIFYKLFESRNGFVVTTTSSRVHNDWIIEAASKRWKERTINDIE
KIKNIVQCRKLQFIGNPVLSRIDKDEIECEVEKKKIRRLAYIEKKSNAAI
ETFYPISXKRFGDWLILKRRVMQQSRPSIQPRSGFMVQPRKLMNVTWKFP
EW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036826XLOC_036826Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058443TCONS_00058443Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 793..813
NoneNo IPR availableCOILSCoilCoilcoord: 314..334
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableGENE3D3.40.50.300coord: 694..915
e-value: 3.4E-36
score: 123.9
NoneNo IPR availableGENE3D3.40.50.300coord: 414..676
e-value: 1.0E-23
score: 83.4
NoneNo IPR availableCDDcd00046DEXDccoord: 434..673
e-value: 5.6805E-12
score: 63.8956
NoneNo IPR availableCDDcd00079HELICccoord: 767..901
e-value: 3.05298E-7
score: 49.1585
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 791..894
e-value: 8.1E-9
score: 45.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 769..893
e-value: 2.9E-9
score: 37.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 752..935
score: 13.317
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 413..700
e-value: 2.2E-17
score: 73.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 425..691
score: 17.268
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 587..676
coord: 738..905
coord: 428..487

Blast
[Close]
BLAST of TCONS_00058443-protein vs. Swiss-Prot (Human)
Match: DHX15 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Homo sapiens GN=DHX15 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.075e-50
Identity = 149/514 (28.99%), Postives = 264/514 (51.36%), Query Frame = 0 
Query:  600 SKDTRICFVTEGLLLQKLKRTNMQTSYDCIILDEAHERGSDTDLLLAHLRDIVNNNNKANNGENLKIVIMSASINAQAFSMFFNNCPIVNCEGKMHDVSLRYKPLLNHDADDVDQSIEEFVDANKKRIVKGRSKGEKKGKAVDSLIKHVVNIIFDDIVTETVEGAPIQRATADGDVLVFLPGQSEIFKCVEEINKRALE---ELKEVNKIHEGKEKRPQKKRKSRNFATQRKFNT---KKVVCCTNIAETSLTIPGVTYVLDSGKAKKMLYNNRLRLATLKMVDISQASAKQRKGRAGRVQPGQCYRLYSKEHHEETMEAFDEPAMKQMSIDKLYLEAMDVSRGLEN-IHLMKDAQPDPESIQNAKERLLNLGFLCKKNQSFFKQEVDISPDGKFALSLMGDVSLEG--AKMVLAAQPYGRVCDTITLAVLLEGNIYTDEETNIERA------KYTNNLGDHLTILNLYKKFEQKLKSANLETVESWCETMGLDFNSL-------KQISKSIDQ 1091
            S  T + ++T+G+LL++     +   Y  IILDEAHER   TD+L+  L+++V   +      +LK+++MSA+++A  F ++F+NCP++   G+ H V + Y P                               E +   +++ I+ V+ I   +                +GD+L+FL GQ EI +  + I +   +   E+ ++  I       PQ++++       +K N    +KVV  TNIAETSLTI GV +V+D G AK+ +YN R+R+ +L +  IS+ASA+QR GRAGR +PG+C+RLY+++ ++  M+    P + + ++  + L+   +  G+++ +H      P PE++  A E LLN  +L   N      + D++  G    S+M +  L+   AKMV+A+  Y    + +++  +L         T  ++A      ++ +  GDHLT+LN+Y  F+Q     N E+V+ WC    +++ SL       +Q+S+ +D+
Sbjct:  228 SAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS------DLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTP-------------------------------EPERDYLEAAIRTVIQIHMCE--------------EEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL--GIDDLVHFDFMDPPAPETLMRALE-LLN--YLAALN-----DDGDLTELG----SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ-----NHESVQ-WCYDNFINYRSLMSADNVRQQLSRIMDR 670
The following BLAST results are available for this feature:
BLAST of TCONS_00058443-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHX151.075e-5028.99Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
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