TCONS_00058459-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058459-protein
Unique NameTCONS_00058459-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length106

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058459-protein ID=TCONS_00058459-protein|Name=TCONS_00058459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=106bp
MGEPPPFDPCECIFSPAGAMRRLISLLRQSQNYCTDDQCFGNPPGPNQNE
DTGMTMFMMFIAWVVVAAALYLFRPTSVRDGSKPARHDNNDDHPDRNDPH
NPPPVM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036837XLOC_036837Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058459TCONS_00058459Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020309Uncharacterised_CD034/YQF4
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020309Uncharacterised protein family, CD034/YQF4PFAMPF11027DUF2615coord: 7..102
e-value: 2.5E-34
score: 117.5
IPR020309Uncharacterised protein family, CD034/YQF4PRODOMPD288703coord: 7..79
e-value: 5.0E-20
score: 234.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..106

Blast
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BLAST of TCONS_00058459-protein vs. Swiss-Prot (Human)
Match: SIM14 (Small integral membrane protein 14 OS=Homo sapiens GN=SMIM14 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.878e-25
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 0 
Query:    7 FDPCECIFSPAGAMRRLISLLRQSQNYCTDDQCFGNPPGPNQNEDTGMTMFMMFIAWVVVAAALYLFRPTSVRDGSKPAR 86
            FDPCEC+ S   AMRRLI+LLRQSQ+YCTD +C    PGP+   D G+++ M+ +AW+V+A  L+L RP ++R  S P +
Sbjct:    6 FDPCECVCSHEHAMRRLINLLRQSQSYCTDTECLQELPGPSG--DNGISVTMILVAWMVIALILFLLRPPNLRGSSLPGK 83
The following BLAST results are available for this feature:
BLAST of TCONS_00058459-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SIM141.878e-2551.25Small integral membrane protein 14 OS=Homo sapiens... [more]
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