TCONS_00058465-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00058465-protein
Unique Name	TCONS_00058465-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1861

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00058465-protein ID=TCONS_00058465-protein|Name=TCONS_00058465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1861bp
MSQVQTQHQQYVTRSTRKPKLNYSSSFKGRSKVSNSNQDGSDGHFRRNDS
LRHSTGSIKNKKMDKALPTTSNGLSDENEPPVSPSVSNLIKGFQSRIGNG
TDTTDFATPGYVAESPTQHRRTNSKRKKISRSNPKKGKMSTDDARYSILQ
SLGISPFAGTENRTLEKSFGYFDIQSLFFKLSNATSLKSTYDEGSSYNKK
FTGASAAHKYMQNEKNGENKNLRESMIDEGDDRCNELVLSCPFFRNEMAE
PEENQQSGDVPSSQKQTKDIAKLISMFNRNRSFENLRHGGAFDSGYGKNR
RHLESSEQSILLEEIKDGSQFFGWDEPKVNGKQIFDFEHIDRGALYYREY
FHEKEHINLFGIDERYGPIGISIIREILPRMAIVGHTDNEKNKRYQYRVV
LRTCDLNALRVTVLENSIPSTFKHGSASRPLPIKDILEFCFPDVQLSCLK
YALTIPKIGEQLLKLDEQQLSLNFKIGLLYCKAGQSTEEQMYNNEKGGSE
FMEFCSVIGDKVSLKGFTGYRAQLDNKNDSTGQHSLYTTFHGREIMFHVS
TELPFTAHDRQQLLRKRHIGNDIVTVIFQEEGAEPFTASIMRSHFQHVFI
IVQVENAHTENTRYSIAVSRSRDVPYFGPPIPPDKFQKNAAFREFLLAKI
VNAEHAAHKSEKFTHMARRTRYEYLKDLANNQVSQQTLETSNKFAFSFTG
KKKEKTHPNVSPEIWLQSGIVWSVKYDFEHDGPGTPTLLSISTKCITFIE
KSTEEVVLSIPCKSVLGWRPTSHTLKIFYDVGKMAFFTMTDDDINELTYV
MKRLKAVTTGCETQDLSLKRNNDGQLGFHVFYEGLVAEVEPYGLAWQAGL
RKGSRLLEISGLCVGNMSHDRMILMLKRPGAVRIVVLPPALNGEPRNYKA
VRTMRRYSSMTSIYSMSMSASNHLDDEEAEEECYSDEEALHSGASSDKDC
VTPSTDSQNEGFRNDYTPPQNRQPRAPKVRSFSHDEAPLRKESISSTPYT
SDASVEPTPPKPISKSTRLSATPAKRPPPGKVGQERFLTSRSASDFSELS
SPYSSSKPKPTPTVTIRTPEKALSPVGSFDHELGELERQLTDTRKSIDAK
FYKSLANSSSPFFRPSKTAGLSSPSFDEENDFQITGVLSQESSDDHAPSS
NRSSIKIPSRQTSEVQSTPIHQYASSSDGHESSNRFKPLKFSQSPRTSPQ
SERRSFKKRNESMEQAMRNPRSSRQETSVYITPTSPTKGRSYGNAEPITF
EIHAKEGHVTQVKPTEEKKSADSANSGSFSDSGILDKKMSSSREAIISDS
DGPNRKGSLVKTKVREAAEIIHERSYGRNSPVPRDIVISRKTHSVDHTNA
PSNEHSKLSQRFSHQHQSTTPGGAADLSKSTSIKEDEKVKEKDVFPKVNR
IQHSPKLSARDSALVKAVGSAARNKQSTRDHQTPTHQSGTSKVILDDSLT
DTFAKLESAFALKSPKTDAQARDSEKRKRRRNFKRRSRNFEPPSTDSSAD
EDSSPDARRKSNGIRIQLKNRNDDPETCSIASNKSEAEQSLEAAISDFHY
SLSSMPEKNKHRNSGPFYSSDQSEETSKVPARPRPPQARYLVGRETRSKS
QDFTAASRPLTGLESKSTGNVDQTKRRSEAKITLTSARPWSPPSSKRVEP
SANIRQNVSNSNSMKKQSTKPKALVLSKDEHKRKEKRSKSLPNQQEEIFV
VEEQIITETSIEDQLSPLPADLPRPLSREPASRYTNSLPGRSKRRRSHAQ
SPEHQKHLRSKSTSCIPLQVRGLDLAASGNAPVATKEDLHVMVTVMEEEL
EKERREKEALKRELNKSQKEKEVILEQSKQAASQLRKFTALFLDASPKEI
EKAKQKYNESR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036839	XLOC_036839	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00058465	TCONS_00058465	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001478	PDZ
IPR011993	PH_dom-like
IPR000331	Rap_GAP_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005096	GTPase activator activity

Vocabulary: **Biological Process**
Term	Definition
GO:0051056	regulation of small GTPase mediated signal transduction

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051056	regulation of small GTPase mediated signal transduction
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1786..1827
None	No IPR available	GENE3D	2.30.42.10		coord: 809..890 e-value: 1.7E-12 score: 47.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1460..1540
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1552..1695
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1711..1764
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 921..1078
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1338..1445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1107..1311
None	No IPR available	CDD	cd00992	PDZ_signaling	coord: 818..887 e-value: 1.05972E-10 score: 59.5026
IPR001478	PDZ domain	SMART	SM00228	pdz_new	coord: 824..890 e-value: 6.0E-10 score: 49.1
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 815..880 score: 12.104
IPR001478	PDZ domain	SUPERFAMILY	50156	PDZ domain-like	coord: 811..889
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 716..807 e-value: 0.002 score: 17.8
IPR000331	Rap GTPase activating protein domain	PFAM	PF02145	Rap_GAP	coord: 491..671 e-value: 1.3E-60 score: 204.1
IPR000331	Rap GTPase activating protein domain	PROSITE	PS50085	RAPGAP	coord: 462..678 score: 69.638
IPR000331	Rap GTPase activating protein domain	SUPERFAMILY	111347	Rap/Ran-GAP	coord: 337..687

Blast

[Close]

BLAST of TCONS_00058465-protein vs. Swiss-Prot (Human)
Match: SI1L3 (Signal-induced proliferation-associated 1-like protein 3 OS=Homo sapiens GN=SIPA1L3 PE=1 SV=3)

HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0
Identity = 358/813 (44.03%), Postives = 478/813 (58.79%), Query Frame = 0

Query:  124 SKRKKISRSNPKKGKMSTDDARYSILQSL---------GISPFAGTENRT---------LEKSFGYFDIQSLFFKLSNATSLKSTYDE-----------GSSYNKKFTGASAAHKYMQNE---KNGENKNLRESM-IDEGDDRCNELVLSCPFFRNEMAEPEENQQSGDVPSSQKQTKDIAKLISMFNRNRSFENLRHGGAFDSGYGKNRRHLESSEQSILLEEIKDGSQFFGWDEPKVNGK-----QIFDFEHIDRGALYYREYFHEKEHINLFGIDERYGPIGISIIREILPRMAIVGHTDNEKNKRYQYRVVLRTCDLNALRVTVLENSIPSTFKHGSASRPLPIKDILEFCFPDVQLSCLKYALTIPKIGEQLLKLDEQQLSLNFKIGLLYCKAGQSTEEQMYNNEKGGSEFMEFCSVIGDKVSLKGFTGYRAQLDNKNDSTGQHSLYTTFHGREIMFHVSTELPFTAHDRQQLLRKRHIGNDIVTVIFQEEGAEPFTASIMRSHFQHVFIIVQVENAHTENTRYSIAVSRSRDVPYFGPPIPPD-KFQKNAAFREFLLAKIVNAEHAAHKSEKFTHMARRTRYEYLKDLANNQVSQQTLETSNKF-AFSFTGKKKEKTHPNVSPEIWLQSGIVWSVKYDFEHDGPGTPTLLSISTKCITFIEKSTEEVVLSIPCKSVLGWRPTSHTLKIFYDVGKMAFFTMTDDDINELTYVMKRLKAVTTGCETQDLSLKRNNDGQLGFHVFYEGLVAEVEPYGLAWQAGLRKGSRLLEISGLCVGNMSHDRMILMLKRPGAVRIVVLPPALNGEPR 896
            +K K+ +R  P +G    D    SI + L         G SP    E R+          +KSF +FD+QS+ F L+ A + + +  +            ++       AS AH     +    + E+ N +E++  D GDD  N+L+LSCP FRNE+         G+                   RN SF     G    SG G    HL        L   +  +     + PK   +     + +  EH+D GA YY++YF  KEH N FG+DE+ GP+ +SI RE L           E   +YQYR++ RT +L  LR ++LE++ P+  KHG+  R LP+KD LE+  P++ + CL+ AL  PK+ EQLLKLDEQ L    K+G+LYCKAGQS+EE+MYNNE+ G  F EF S+IG+KV LKGFT Y AQLD K DSTG HSLYT +   EIMFHVST LP+T ++RQQLLRKRHIGNDIVT+IFQE GA PFT   +RSHFQHVFIIV+V N  T+N  YS+AV+RS+D P FGPPIP    F+K+  FR+FLLAK++NAE+AAHKS+KF  MA RTR EYLKDLA N VS   ++++ KF   S T KKKEKT      E      I W V       G     +L IS + +  ++  T+EVV +  C  V+GW P S TLKIFY  G   F   T+  + ++  +++RLK +T+G ET D++L+RN  GQLGFHV Y+G VAEVE YG AWQAGLR+GSRL+EI  + V  ++HD+MI +L+    V++V++PP  +G PR
Sbjct:  277 TKEKEKARKKPARGLGGGDTVDSSIFRKLRSSKPEGEAGRSPGEADEGRSPPEASRPWVCQKSFAHFDVQSMLFDLNEAAANRVSVSQRRNTTTGASAASAASAMASLTASRAHSLGGLDPAFTSTEDLNCKENLEQDLGDDNSNDLLLSCPHFRNEIG--------GEC-----------------ERNVSFSRASVGSP-SSGEG----HLAEPA----LSAYRTNASISVLEVPKEQQRTQSRPRQYSIEHVDLGARYYQDYFVGKEHANYFGVDEKLGPVAVSIKREKL-------EDHKEHGPQYQYRIIFRTRELITLRGSILEDATPTATKHGTG-RGLPLKDALEYVIPELNIHCLRLALNTPKVTEQLLKLDEQGLCRKHKVGILYCKAGQSSEEEMYNNEEAGPAFEEFLSLIGEKVCLKGFTKYAAQLDVKTDSTGTHSLYTMYQDYEIMFHVSTLLPYTPNNRQQLLRKRHIGNDIVTIIFQEPGALPFTPKNIRSHFQHVFIIVRVHNPCTDNVCYSMAVTRSKDAPPFGPPIPSGTTFRKSDVFRDFLLAKVINAENAAHKSDKFHTMATRTRQEYLKDLAENCVSNTPIDSTGKFNLISLTSKKKEKTKARAGAEQHSAGAIAWRVVAQDYAQGVEIDCILGISNEFVVLLDLRTKEVVFNCYCGDVIGWTPDSSTLKIFYGRGDHIFLQATEGSVEDIREIVQRLKVMTSGWETVDMTLRRNGLGQLGFHVKYDGTVAEVEDYGFAWQAGLRQGSRLVEICKVAVVTLTHDQMIDLLRTSVTVKVVIIPPFEDGTPR 1047

The following BLAST results are available for this feature:

BLAST of TCONS_00058465-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00058465-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SI1L3	0.000e+0	44.03	Signal-induced proliferation-associated 1-like pro...	[more]

You are here

TCONS_00058465-protein (polypeptide) - C. hemisphaerica