TCONS_00058482-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058482-protein
Unique NameTCONS_00058482-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length266

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058482-protein ID=TCONS_00058482-protein|Name=TCONS_00058482-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
MVLKKAALMTMKHKLEAYSIFNQEDIEDFRAVFNYFTNGKREIITAKQVR
TALRSLQPKPKDEEINDIFDKITEKKGGEVDFHGFLDALHTAIDKVRKQH
IKDNKDRKKSQAQTFTELTEDQTNDIREAFSMFDQDGDGTISMEELREVM
TNLGQTVSDGDIKEMLEDVDTDAEGNLDFESFKKIMSQTMGATDINKEMR
EAFAFFDQDGDGTITSEELWQCMKKLGEDLTLEEVQDMLKEADADGNGEI
EFAEFVKLLTGPMKTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036846XLOC_036846Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058482TCONS_00058482Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 198..226
e-value: 2.7E-6
score: 36.9
coord: 125..153
e-value: 1.1E-8
score: 44.8
coord: 161..189
e-value: 0.12
score: 21.5
coord: 234..262
e-value: 2.5E-5
score: 33.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 124..186
e-value: 4.6E-11
score: 42.9
coord: 198..258
e-value: 1.0E-11
score: 45.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 194..229
score: 15.462
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 24..59
score: 6.173
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 230..265
score: 12.254
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 60..95
score: 6.954
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 121..156
score: 16.661
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 157..192
score: 10.58
IPR002048EF-hand domainCDDcd00051EFhcoord: 198..260
e-value: 1.44096E-17
score: 73.3509
IPR002048EF-hand domainCDDcd00051EFhcoord: 125..187
e-value: 6.03545E-14
score: 63.3357
NoneNo IPR availableGENE3D1.10.238.10coord: 174..213
e-value: 2.8E-17
score: 61.8
coord: 78..139
e-value: 1.7E-15
score: 56.1
NoneNo IPR availableGENE3D1.10.238.10coord: 140..173
e-value: 2.0E-18
score: 65.6
NoneNo IPR availableGENE3D1.10.238.10coord: 214..265
e-value: 5.3E-21
score: 73.8
NoneNo IPR availableGENE3D1.10.238.10coord: 9..53
e-value: 5.6E-4
score: 19.3
NoneNo IPR availableGENE3D1.10.238.10coord: 54..77
e-value: 1.6E-6
score: 27.6
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 243..255
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 207..219
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 134..146
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 18..99
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 111..261

Blast
[Close]
BLAST of TCONS_00058482-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.410e-42
Identity = 68/145 (46.90%), Postives = 105/145 (72.41%), Query Frame = 0 
Query:  117 ELTEDQTNDIREAFSMFDQDGDGTISMEELREVMTNLGQTVSDGDIKEMLEDVDTDAEGNLDFESFKKIMSQTMGATDINKEMREAFAFFDQDGDGTITSEELWQCMKKLGEDLTLEEVQDMLKEADADGNGEIEFAEFVKLLTG 261
            +LTE+Q  + +EAFS+FD+DGDGTI+ +EL  VM +LGQ  ++ ++++M+ +VD D  G +DF  F  +M++ M  TD  +E+REAF  FD+DG+G I++ EL   M  LGE LT EEV +M++EAD DG+G++ + EFV+++T 
Sbjct:    4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148

HSP 2 Score: 91.6633 bits (226), Expect = 4.116e-23
Identity = 55/167 (32.93%), Postives = 89/167 (53.29%), Query Frame = 0 
Query:   21 FNQEDIEDFRAVFNYFTNGKREIITAKQVRTALRSLQPKPKDEEINDIFDKITEKKGGEVDFHGFLDALHTAIDKVRKQHIKDNKDRKKSQAQTFTELTEDQTNDIREAFSMFDQDGDGTISMEELREVMTNLGQTVSDGDIKEMLEDVDTDAEGNLDFESFKKIMS 187
              +E I +F+  F+ F       IT K++ T +RSL   P + E+ D+ +++     G +DF  FL  +       RK  +KD                 D   +IREAF +FD+DG+G IS  ELR VMTNLG+ ++D ++ EM+ + D D +G +++E F ++M+
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM------ARK--MKDT----------------DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147

HSP 3 Score: 78.1814 bits (191), Expect = 5.313e-18
Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = 0 
Query:  198 EMREAFAFFDQDGDGTITSEELWQCMKKLGEDLTLEEVQDMLKEADADGNGEIEFAEFVKLLTGPMK 264
            E +EAF+ FD+DGDGTIT++EL   M+ LG++ T  E+QDM+ E DADGNG I+F EF+ ++   MK
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
The following BLAST results are available for this feature:
BLAST of TCONS_00058482-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM36.410e-4246.90Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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