TCONS_00058564-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00058564-protein
Unique Name	TCONS_00058564-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	550

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00058564-protein ID=TCONS_00058564-protein|Name=TCONS_00058564-protein|organism=Clytia hemisphaerica|type=polypeptide|length=550bp
MIPPQEKLQGLLYNWTDDLPQCKETGVGYQTNLIYRAGGGMGATTDYEDR
SFHFSCPGECFLYGVLDGNDGPMVADFAGQRLPAELLLGQIKEEYGDREV
KQRLREAFDSVSKGFVEDLIDEPLMEKMNLETQLPEGMSKNDAQKRFPAL
FQRLEQLEKRIKGGCSAAIALIHKSRLFVANVGDARALLCRVDPQNEELG
VIQLSTDHTIATNSELQRLANLGLNIERLQQIPIVLKTTRSLGDWALKGG
YTSHPDLKEAREEPILSTPSVHGGEDILKNMKFLVLMSRGVYIAYEQATG
IPKDQVNAHIANLIYNEILKQTTIENVAQCVIDHICRIHKEQFTKSGNVT
CLRREDMTLLIRLFNIKVGQTPSPNVPRRQARPNLTPLKMPEKRRTPSPT
SKPDTPSSTGSSTSTPATATPGSAGSATTSPQWGFPGGNQMNNPRSPSPL
TVTFTEQQARPQPLAAPALPPRQGVAPPPVKAAWAAPRSNERNDSQNSMD
DKTKMFNRPAEPLETDAEGRIKAYVSFDEFNEKIMAAGGPEEVFRDFLCR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036887	XLOC_036887	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00058564	TCONS_00058564	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001932	PPM-type_phosphatase_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..514
None	No IPR available	CDD	cd00143	PP2Cc	coord: 48..352 e-value: 7.38714E-32 score: 122.05
IPR001932	PPM-type phosphatase domain	SMART	SM00332	PP2C_4	coord: 24..332 e-value: 6.3E-24 score: 95.5
IPR001932	PPM-type phosphatase domain	GENE3D	3.60.40.10		coord: 11..370 e-value: 4.5E-45 score: 153.7
IPR001932	PPM-type phosphatase domain	PFAM	PF00481	PP2C	coord: 97..326 e-value: 4.6E-30 score: 105.0
IPR001932	PPM-type phosphatase domain	PROSITE	PS51746	PPM_2	coord: 40..364 score: 21.875
IPR001932	PPM-type phosphatase domain	SUPERFAMILY	81606	PP2C-like	coord: 31..122 coord: 158..359

Blast

[Close]

BLAST of TCONS_00058564-protein vs. Swiss-Prot (Human)
Match: TAB1 (TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Homo sapiens GN=TAB1 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.825e-90
Identity = 188/524 (35.88%), Postives = 268/524 (51.15%), Query Frame = 0

Query:   14 NWTDDLPQCKETGVGYQTNLIYRAGGGMGATTDYEDRSFHFSCPGECFLYGVLDGNDGPMVADFAGQRLPAELLLGQIKEEYGDREVKQRLREAFDSVSKGFVEDLIDEPLMEKMNLETQLPEGMSKNDAQKRFPALFQRLEQLEKRIKGGCSAAIALIHKSRLFVANVGDARALLCRVDPQNEELGVIQLSTDHTIATNSELQRLANLGLNIERLQQIPIVL--KTTRSLGDWALKGGYTSHPDLKEAREEPILSTPSVHGGEDILKNMKFLVLMSRGVYIAYEQATGIPKDQVNAHIANLIYNEILKQTTIENVAQCVIDHICRIHKEQFTKSGNVT--CLRREDMTLLIRLFNIKVGQTPSPNVPRRQARPNLTPLKMPEKRRTPSPTSKPDTPSSTGSSTSTPATATPGSAGSATTSPQWGFPGGNQMNNPRSPSPL---TVTFTEQQARPQPLAAPALPPRQGVAPPPVKAAWAAPRSNERNDSQNSMDDKTKMFNRPAEPLETDAEGRIKAYVSFDEF 530
            +WTDDLP C  +GVG  +N  Y A G    +   ED    F     CFLYGV +G DG  V +F  QRL AELLLGQ+  E+ + +V++ L +AFD V + F+E  ID+ L EK +L++QLPEG+ ++    ++  + +RL+ LE+ I GG  A +A++  ++L+VANVG  RALLC+     + L V QL+ DHT     EL RL+ LGL+  +++Q+ I+   ++TR +GD+ +K GYT    L  A+ +PI++ P +HG + +     FLVLMS G+Y A E A G    Q N  IA +I  E  KQT+++ VAQ V+D + RIH + F   G     C R EDMTLL+R F   +G+   P           TP   P       P S P + + + S TS   +    S G               +N   S S L   T T T Q        +P L  +                +N    S +S  D     +RPA  L    +GR++ YV F EF
Sbjct:   16 SWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES-IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCK--STVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHG--PGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPLGEMSQP-----------TPSPAPAAGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQG-------------QMVNGAHSASTLDEATPTLTNQ--------SPTLTLQS---------------TNTHTQSSSSSSDGGLFRSRPAHSLPPGEDGRVEPYVDFAEF 487

The following BLAST results are available for this feature:

BLAST of TCONS_00058564-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00058564-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TAB1	1.825e-90	35.88	TGF-beta-activated kinase 1 and MAP3K7-binding pro...	[more]

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TCONS_00058564-protein (polypeptide) - C. hemisphaerica