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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00058657-protein ID=TCONS_00058657-protein|Name=TCONS_00058657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=724bp
MGFNPRFIFLVCLSWHVLILQTVSGNDEIFNGRRYFFGSTNKTWQGAEND
CIGRGGHLTSVHSKAENDFLTQQIVSRGGVSNWYGGIRVNNIFTWSDKTP
FTTTFWGPGEPNGLLGEDCLHMNTDHLGQWNDLPCNVEFPYVCKLGKANN
LPLKNCKLDLGALLDDSGSIGSETEFRKETNFIKSLAKDLTIGPSNTRVS
VIKFSTNARLEFKFNDIEGQDRTALYNALDGLSWDGDLTYTVDALELAQK
EMFSEANGQRKNVSKVLLVVTDGKSTSGVQAVQRASDVLSKQGVNIIPIG
IGNVDQSELEAMATNKSNVFYVNNLSELESAVWGVLEAKCTPIKCHYKKC
IYSGWSSWSATCGLIADRSRSLTRSEDAVEERFGGCAGLPTTCENREIET
ITLNSCPYTTLAPPTQTQPTPSLVKWGSNEYYFSDVKVTWFEAERLCIAR
GGTLATILSLEEDDFMLNQLTKRKPFNERTISYWLDGVKRNMKYVWNDGS
EMIYKNLGGGRADEDSYTEGCVSVMYGPGFLVPEPYSWLKGSCTNYGYPI
QYVCKGKKLNDSPSITTAATMAPTPEPLPSLVTWGSNEYYFSDVKVNWFE
AERLCIARGGTLATILSLEEDDFMLDQLTKRKPFNERTISYWLDGVKRNM
KYVWNDGSEMIYKNLGGGRADEDSYTEGCVSVMYGPGFLVPEPYSWLKGS
CTNYGYPIQYVXDRVFLFPSLTLG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR00453 | VWFADOMAIN | coord: 266..274
score: 55.77
coord: 198..212
score: 30.38
coord: 158..175
score: 37.71 |
| None | No IPR available | CDD | cd01450 | vWFA_subfamily_ECM | coord: 158..322
e-value: 3.62629E-39
score: 141.275 |
| None | No IPR available | CDD | cd00037 | CLECT | coord: 431..555
e-value: 5.06847E-15
score: 71.4969 |
| None | No IPR available | CDD | cd00037 | CLECT | coord: 589..703
e-value: 1.54652E-13
score: 66.8745 |
| None | No IPR available | CDD | cd00037 | CLECT | coord: 35..144
e-value: 3.06088E-30
score: 115.024 |
| IPR002035 | von Willebrand factor, type A | SMART | SM00327 | VWA_4 | coord: 157..340
e-value: 6.6E-42
score: 155.2 |
| IPR002035 | von Willebrand factor, type A | GENE3D | 3.40.50.410 | | coord: 152..344
e-value: 1.9E-37
score: 128.6 |
| IPR002035 | von Willebrand factor, type A | PFAM | PF00092 | VWA | coord: 159..330
e-value: 2.8E-37
score: 128.6 |
| IPR002035 | von Willebrand factor, type A | PROSITE | PS50234 | VWFA | coord: 159..336
score: 28.85 |
| IPR002035 | von Willebrand factor, type A | SUPERFAMILY | 53300 | vWA-like | coord: 149..340 |
| IPR001304 | C-type lectin-like | SMART | SM00034 | CLECT_2 | coord: 23..144
e-value: 2.8E-26
score: 103.3
coord: 577..710
e-value: 7.8E-11
score: 52.0
coord: 419..555
e-value: 1.1E-13
score: 61.4 |
| IPR001304 | C-type lectin-like | PFAM | PF00059 | Lectin_C | coord: 595..704
e-value: 1.4E-8
score: 35.4
coord: 437..554
e-value: 3.3E-9
score: 37.3
coord: 41..144
e-value: 5.8E-17
score: 62.3 |
| IPR001304 | C-type lectin-like | PROSITE | PS50041 | C_TYPE_LECTIN_2 | coord: 584..701
score: 13.85 |
| IPR001304 | C-type lectin-like | PROSITE | PS50041 | C_TYPE_LECTIN_2 | coord: 426..543
score: 14.08 |
| IPR001304 | C-type lectin-like | PROSITE | PS50041 | C_TYPE_LECTIN_2 | coord: 30..144
score: 22.426 |
| IPR016186 | C-type lectin-like/link domain | GENE3D | 3.10.100.10 | | coord: 22..151
e-value: 4.2E-34
score: 117.3 |
| IPR016186 | C-type lectin-like/link domain | GENE3D | 3.10.100.10 | | coord: 564..709
e-value: 3.3E-19
score: 68.6
coord: 409..561
e-value: 2.8E-21
score: 75.4 |
| IPR018378 | C-type lectin, conserved site | PROSITE | PS00615 | C_TYPE_LECTIN_1 | coord: 119..143 |
| IPR016187 | C-type lectin fold | SUPERFAMILY | 56436 | C-type lectin-like | coord: 581..704 |
| IPR016187 | C-type lectin fold | SUPERFAMILY | 56436 | C-type lectin-like | coord: 23..145 |
| IPR016187 | C-type lectin fold | SUPERFAMILY | 56436 | C-type lectin-like | coord: 420..555 |
Blast
BLAST of TCONS_00058657-protein vs. Swiss-Prot (Human)
Match: CLC4K (C-type lectin domain family 4 member K OS=Homo sapiens GN=CD207 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.708e-20 Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 0
Query: 19 ILQTVSGNDEIFNGRRYFFGSTNKTWQGAENDCIGRGGHLTSVHSKAENDFLTQQIVSRGGVSNWYGGIR--VNNIFTWSDKTPF----TTTFWGPGEPNGL-LGEDCLHMNTDHLGQWNDLPCNVEFPYVCK 144
ILQ VS + F G Y+F KTW AE C+ R HLTSV S++E +FL + + GG+ W G + + ++W D TPF + FW PGEPN E C ++ L WND PC+ F ++CK
Sbjct: 191 ILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYK---TAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICK 320
The following BLAST results are available for this feature:
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