TCONS_00058670-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058670-protein
Unique NameTCONS_00058670-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length449

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058670-protein ID=TCONS_00058670-protein|Name=TCONS_00058670-protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
MALDEWSLGSLNFNIKTIERDFLTKDDDGENNELVCLRVARFSKVPKIDF
RKVRIGKKKTIKFEVFNPNNFSTSIQFKQFSNNDFYLEIANSSPSRQNEP
ASEEGIPLLLEPDQLKYVFVTWTPSSSGNMREVLTVQWDGGSKLQVIFLG
NCPDEPQKKTAKIKKITKTETLSQKINNKGSNENRKALTAIQPVTPARRT
TFLVNKHQSQLAVSDENKENSSISPISFKKPSNIPKKAQNSSRNRNTLKI
AADNDPRRQTFNISKKEDASRNLFGTSSKKINKKPSAKPPTEPPNPTQPK
PFLKRTSISQSLQKPTLKKDPMPFAAKNMFYDERWIEKQERGFTNWLNYL
LTPFEENCPADNSQPQDRRETFTIDAQKKQEIAPTREVLSFRAYSLRRRM
VQLRRSACRCYQSEDFRFVIHKIEKEVECGLISVRGEKHILADLGMFSF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036959XLOC_036959Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058670TCONS_00058670Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031549ASH
IPR001715CH-domain
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031549Abnormal spindle-like microcephaly-associated protein, ASH domainPFAMPF15780ASHcoord: 37..146
e-value: 2.4E-9
score: 37.2
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 308..432
e-value: 1.2E-4
score: 21.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 38..153
e-value: 1.6E-8
score: 34.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..303

Blast
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BLAST of TCONS_00058670-protein vs. Swiss-Prot (Human)
Match: ASPM (Abnormal spindle-like microcephaly-associated protein OS=Homo sapiens GN=ASPM PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 8.746e-31
Identity = 92/262 (35.11%), Postives = 130/262 (49.62%), Query Frame = 0 
Query:  194 VTPARRTTFLVNKHQSQLAVSD--------ENKENSSISPISFKKPSNIPKKAQNSSRNRNTLKIAADNDPRRQTFNISKKEDASRNLFGTSSKKINKKPSAKPPTEPPNPTQPKPFLKRTSISQSLQKPTLKKDPMPFAAKNMFYDERWIEKQERGFTNWLNYLLTPFEENCPADNSQPQDRRETFTIDAQKKQEI--APTREVLSFRAYSLRRRMVQLRRSACRCYQSEDFRFVIHKIEKEVECGLISVRGEKHILADLG 445
            VTP+  T  +  K +S  ++ D        E+ E   I  I F  PS     A   ++N  T    +     R+  N+ KK D S  +F T   K NK+          + T  KP            K  + + PMPFAAKNMFYDERW EKQE+GFT WLN++LTP +     + S+         I+ Q K  +  APT+E +S RAY+ R R+ +LRR+ACR + SE     I K+E E+E   + VR ++H+  D+G
Sbjct:  562 VTPSSTTASVARKRKSDGSMEDANVRVAITEHTEVREIKRIHFS-PSEPKTSAVKKTKNVTT--PISKRISNREKLNLKKKTDLS--IFRTPISKTNKRTKPIIAVAQSSLTFIKPL-----------KTDIPRHPMPFAAKNMFYDERWKEKQEQGFTWWLNFILTPDDFTVKTNISEVNAATLLLGIENQHKISVPRAPTKEEMSLRAYTARCRLNRLRRAACRLFTSEKMVKAIKKLEIEIEARRLIVRKDRHLWKDVG 807
The following BLAST results are available for this feature:
BLAST of TCONS_00058670-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASPM8.746e-3135.11Abnormal spindle-like microcephaly-associated prot... [more]
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