TCONS_00058826-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058826-protein
Unique NameTCONS_00058826-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length522

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058826-protein ID=TCONS_00058826-protein|Name=TCONS_00058826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=522bp
MLEQEVCNESDVSEGQMKQVEFGSGKILLSKYNGQISAVSGKCTHYGAPL
ITGAYKDGKVRCPWHGACFNAVTGDIEDFPGLDSLHKYEVAIKNGKVIVK
GSENTLKDFRCIKPMEDSCATKEIFLIIGGGGAAITCAENLRQQGFTGKI
IMATSENHVPYDRPKLSKMLNAEPSKLYLRTPEFLKEKNIEVLYGKKAMK
VDLQDKTVVFEDGTSQKYTKLFTATGGSPKLLNVPGSELGGVLYLRTPDD
ANQIDKLCPEKEIVILGTGFISMELAAYFSSKCKSVTVIGSGRTKYPFEK
LLGDRIGKMYYNQHTSKGVKLIMDSPVKELVGENGKVAGVVLSNGQTIKA
DVVLVGIGVTPSTKYFNGAGVQMNSLGYVIVDKYLCASSDVYCGGDIVSF
PYHYGDNEMINIGHWQLASNHGRCAAMNMLGKETPCVTVPFFWTQQYGKS
LRYAGYAGGYDEILYEGNVEELTFAAYYFRKGKFVAIACINMGAKASEMA
LLIQDNQLPSMEDMKAKITSKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037064XLOC_037064Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058826TCONS_00058826Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR023753FAD/NAD-binding_dom
IPR028202Reductase_C
IPR016156FAD/NAD-linked_Rdtase_dimer
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00411PNDRDTASEIcoord: 124..146
score: 29.24
coord: 351..365
score: 39.61
coord: 391..398
score: 42.4
NoneNo IPR availablePRINTSPR00368FADPNRcoord: 218..236
score: 28.34
coord: 262..280
score: 30.6
coord: 350..366
score: 36.46
coord: 125..144
score: 29.69
NoneNo IPR availableCDDcd03478Rieske_AIFL_Ncoord: 5..98
e-value: 1.3472E-49
score: 165.873
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 4..88
e-value: 4.5E-18
score: 64.9
IPR017941Rieske [2Fe-2S] iron-sulphur domainGENE3D2.102.10.10coord: 2..87
e-value: 5.9E-26
score: 90.9
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 4..99
score: 24.811
IPR017941Rieske [2Fe-2S] iron-sulphur domainSUPERFAMILY50022ISP domaincoord: 4..101
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 262..437
e-value: 6.5E-22
score: 77.6
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 88..225
e-value: 1.5E-14
score: 53.8
IPR023753FAD/NAD(P)-binding domainPFAMPF07992Pyr_redox_2coord: 126..422
e-value: 1.2E-49
score: 169.1
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 126..279
coord: 311..455
IPR028202Reductase, C-terminalPFAMPF14759Reductase_Ccoord: 441..510
e-value: 1.2E-11
score: 44.9
IPR016156FAD/NAD-linked reductase, dimerisation domainGENE3D3.30.390.30coord: 438..520
e-value: 3.2E-17
score: 62.3
IPR016156FAD/NAD-linked reductase, dimerisation domainSUPERFAMILY55424FAD/NAD-linked reductases, dimerisation (C-terminal) domaincoord: 434..513

Blast
[Close]
BLAST of TCONS_00058826-protein vs. Swiss-Prot (Human)
Match: AIFM3 (Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIFM3 PE=1 SV=1)

HSP 1 Score: 468.389 bits (1204), Expect = 4.367e-160
Identity = 222/510 (43.53%), Postives = 328/510 (64.31%), Query Frame = 0 
Query:    2 LEQEVCNESDVSEGQMKQVEFGSGKILLSKYNGQISAVSGKCTHYGAPLITGAYKDGKVRCPWHGACFNAVTGDIEDFPGLDSLHKYEVAIKNGKVIVKGSENTLKDFR-------CIKPMEDSCATKEIFLIIGGGGAAITCAENLRQQGFTGKIIMATSENHVPYDRPKLSKMLNAEPSKLYLRTPEFLKEKNIEVLYGKKAMKVDLQDKTVVFEDGTSQKYTKLFTATGGSPKLLNVPGSELGGVLYLRTPDDANQIDKLCPEKEIVILGTGFISMELAAYFSSKCKSVTVIGSGRTKYPFEKLLGDRIGKMYYNQHTSKGVKLIMDSPVKELVGENGKVAGVVLSNGQTIKADVVLVGIGVTPSTKYFNGAGVQMNSLGYVIVDKYLCAS-SDVYCGGDIVSFPYHYGDNEMINIGHWQLASNHGRCAAMNMLGKETPCVTVPFFWTQQYGKSLRYAGYAGGYDEILYEGNVEELTFAAYYFRKGKFVAIACINMGAKASEMALLI 503
            +E  VC+  D+  GQM++VE G GK+LL K NG+  A+  KC HYGAPL+ G    G+VRCPWHGACFN  TGD+EDFPGLDSLHK++V I+  KV V+ S+  L+  R       CI P     ++  + LI+G G A + CAE LRQ+GF+ +I++ T + H+PYDRPKLSK L+ +P +L LR  EF +   IEVL   + + VD++ K VVF+DG   +Y+KL  A G SPK L+  G E+  V  +RTP+DAN++ +L   + +V++G GF+ ME+AAY + K  SV+V+    T  PF + LG+R+G+       +  VK  M + V EL G+ GK+  VVL + + ++ADV +VGIG  P+T +   +G+ ++S G++ V+K +  +   V+  GD V+FP  + +N  +NI HWQ+A   GR AA NML +E    TVP+ WT  +GKSLRYAGY  G+D+++ +G++EEL F A+Y +  + +A+A +N     S++A ++
Sbjct:   68 VEAAVCHVKDLENGQMREVELGWGKVLLVKDNGEFHALGHKCPHYGAPLVKGVLSRGRVRCPWHGACFNISTGDLEDFPGLDSLHKFQVKIEKEKVYVRASKQALQLQRRTKVMAKCISPSAGYSSSTNV-LIVGAGAAGLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSLDTQPEQLALRPKEFFRAYGIEVLTEAQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGSSPKTLSCKGKEVENVFTIRTPEDANRVVRLARGRNVVVVGAGFLGMEVAAYLTEKAHSVSVVELEET--PFRRFLGERVGRALMKMFENNRVKFYMQTEVSELRGQEGKLKEVVLKSSKVVRADVCVVGIGAVPATGFLRQSGIGLDSRGFIPVNKMMQTNVPGVFAAGDAVTFPLAWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEAEMSTVPYLWTAMFGKSLRYAGYGEGFDDVIIQGDLEELKFVAFYTKGDEVIAVASMNYDPIVSKVAEVL 574
The following BLAST results are available for this feature:
BLAST of TCONS_00058826-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AIFM34.367e-16043.53Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIF... [more]
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