TCONS_00058916-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058916-protein
Unique NameTCONS_00058916-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058916-protein ID=TCONS_00058916-protein|Name=TCONS_00058916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
MLKQYLHRYQGHIGAALVLGGVDVSGPCLYTIAPHGSTDKLPYVTMGSGS
LAAMAVFEAGFRPNMELDEARELVRQAIRGGIFNDLGSGSNVDVCVITKD
KVDYIRPYDEANKKGVRQRSYLFPHGTTEVLSSSVRMFDVEETTVTKTXS
YLYPHGTTEVLSSSVRMFDVEETTVTKIGDVEAMET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037102XLOC_037102Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058916TCONS_00058916Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR024689Proteasome_bsu_C
IPR001353Proteasome_sua/b
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
cellular_component GO:0005839 proteasome core complex
molecular_function GO:0004298 threonine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 1..139
e-value: 1.1E-31
score: 109.7
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 1..131
IPR024689Proteasome beta subunit, C-terminalPFAMPF12465Pr_beta_Ccoord: 111..145
e-value: 4.9E-12
score: 44.9
coord: 146..175
e-value: 1.6E-6
score: 27.3
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 1..97
e-value: 2.4E-21
score: 76.0

Blast
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BLAST of TCONS_00058916-protein vs. Swiss-Prot (Human)
Match: PSB7 (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.602e-64
Identity = 95/141 (67.38%), Postives = 113/141 (80.14%), Query Frame = 0 
Query:    1 MLKQYLHRYQGHIGAALVLGGVDVSGPCLYTIAPHGSTDKLPYVTMGSGSLAAMAVFEAGFRPNMELDEARELVRQAIRGGIFNDLGSGSNVDVCVITKDKVDYIRPYDEANKKGVRQRSYLFPHGTTEVLSSSVRMFDVE 141
            MLKQ L RYQG+IGAALVLGGVDV+GP LY+I PHGSTDKLPYVTMGSGSLAAMAVFE  FRP+ME +EA+ LV +AI  GIFNDLGSGSN+D+CVI+K+K+D++RPY   NKKG R   Y    GTT VL+  +   ++E
Sbjct:  125 MLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPLEIE 265
The following BLAST results are available for this feature:
BLAST of TCONS_00058916-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSB71.602e-6467.38Proteasome subunit beta type-7 OS=Homo sapiens GN=... [more]
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