TCONS_00058891-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058891-protein
Unique NameTCONS_00058891-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length371

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058891-protein ID=TCONS_00058891-protein|Name=TCONS_00058891-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
MDIPMMRLLQILRKGKSKIPGTFLFTSSIRWKSYQALRNALSAEEIYSEL
IKGNRGALAKGITLTESTRQDHIDEAHKLLHLTLEYLKNKQTEKPTFRIG
LTGSPGAGKSTLIETLGKQLTSLGHKVAVLAVDPSSAKTGGSLLGDRTRM
VELSHDPNAFIRPSPSSGTLGGVTRRTNEAIVLCEGAGYDIILVETVGIG
QSEFAVSNMTDMFVLIIPPGSGDELQGIKKGVVEMADLVLINKADGDLLP
AARKVQTEYMSALKVLQRPGAKWTPKVYPVSALHNEGLDKAWWKIEQYKS
KMLEDETFLQRRKHQYKSWMWNYVQDNIMERFLSNEKVKNRIKHFEILVE
NEQVHPAFAADELLKIFTNEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037093XLOC_037093Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058891TCONS_00058891Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005129GTPase_ArgK
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005129SIMIBI class G3E GTPase, ArgK/MeaBTIGRFAMTIGR00750TIGR00750coord: 53..364
e-value: 3.8E-91
score: 303.3
NoneNo IPR availableGENE3D1.10.287.130coord: 307..366
e-value: 5.1E-16
score: 58.2
NoneNo IPR availableGENE3D3.40.50.300coord: 95..304
e-value: 2.0E-36
score: 125.0
NoneNo IPR availablePFAMPF03308ArgKcoord: 58..336
e-value: 6.2E-94
score: 313.8
NoneNo IPR availableGENE3D1.20.5.170coord: 38..87
e-value: 3.0E-12
score: 45.6
NoneNo IPR availableCDDcd03114ArgK-likecoord: 98..245
e-value: 7.62198E-82
score: 247.99
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 41..367

Blast
[Close]
BLAST of TCONS_00058891-protein vs. Swiss-Prot (Human)
Match: MMAA (Methylmalonic aciduria type A protein, mitochondrial OS=Homo sapiens GN=MMAA PE=1 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 6.742e-123
Identity = 177/332 (53.31%), Postives = 235/332 (70.78%), Query Frame = 0 
Query:   44 EEIYSELIKGNRGALAKGITLTESTRQDHIDEAHKLLHLTLEYLKNKQTE---KP-TFRIGLTGSPGAGKSTLIETLGKQLTSLGHKVAVLAVDPSSAKTGGSLLGDRTRMVELSHDPNAFIRPSPSSGTLGGVTRRTNEAIVLCEGAGYDIILVETVGIGQSEFAVSNMTDMFVLIIPPGSGDELQGIKKGVVEMADLVLINKADGDLLPAARKVQTEYMSALKVLQRPGAKWTPKVYPVSALHNEGLDKAWWKIEQYKSKMLEDETFLQRRKHQYKSWMWNYVQDNIMERFLSNEKVKNRIKHFEILVENEQVHPAFAADELLKIFTNEN 371
            +++Y+ LI+G R  LA+ ITL EST     + A  LL   L Y + ++     KP  FR+GL+G PGAGKST IE  GK LT  GHK++VLAVDPSS  +GGSLLGD+TRM ELS D NA+IRPSP+ GTLGGVTR TNEAI+LCEGAGYDIIL+ETVG+GQSEFAV++M DMFVL++PP  GDELQGIK+G++EMADLV + K+DGDL+  AR++Q EY+SALK+L++    W PKV  +SA   EG+ + W K++ ++  ML       +R+ Q K WMWN +Q++++E F ++  V+ +I   E  V    + P  AAD LLK F + +
Sbjct:   87 DKLYTGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLLYHREQEQSNKGKPLAFRVGLSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCTSGGSLLGDKTRMTELSRDMNAYIRPSPTRGTLGGVTRTTNEAILLCEGAGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVAVTKSDGDLIVPARRIQAEYVSALKLLRKRSQVWKPKVIRISARSGEGISEMWDKMKDFQDLMLASGELTAKRRKQQKVWMWNLIQESVLEHFRTHPTVREQIPLLEQKVLIGALSPGLAADFLLKAFKSRD 418
The following BLAST results are available for this feature:
BLAST of TCONS_00058891-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMAA6.742e-12353.31Methylmalonic aciduria type A protein, mitochondri... [more]
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