TCONS_00058987-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00058987-protein
Unique Name	TCONS_00058987-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1021

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00058987-protein ID=TCONS_00058987-protein|Name=TCONS_00058987-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1021bp
MSSYVSVANTIKEFEYWLRLTCFLHDPTKNALLQVLHNKSNDPSYQGIPD
NPASLYQFFSNNQNTLNQLVKKKLLKKDQLDLLLPPGGNQTFSSEFDVTL
IAFLIQNFTTLPPPKKGWKTKNPPPTDTSLAAFVIRAREWRNFINHIDAK
TIDLLLFQKKWQEGCDIINGLHYQYNTKFLETMPLDPKHHHVLKALNSCL
AKLKSSQKVLSNDLQDLQDEVSDIQNDITDIQSAISDVKNDQAATEKKIV
KIETNMESQDQSITNMKGDIEDMNEKFDEMASQIESISAAVELHDSLNPK
ETAHSGNKDYCLMEVRQFVSSEIGDEKGKLLQRLSKTNSKGLNVEKAIEN
VPWIDLKKNLLKLGRQDMVENIEKHTLITEGLYAASIQLKQKTIKKFIDL
LVQEPFSPSTLNTCYVPREERFVNLTILDSKEYEEQFSNSDRDVLMRQMF
KGREGVAMNELFRINDEIVVARGVGGSGKTSLVEMYNLKWAKGELNTDFQ
IEFMFTFACRELNNLVNNKTTLEELFKTCYPEVFELITLDDLRNLGSRVM
IILDGMDELHNIYEQNKSLITMSHVHIVRKLIDPNFIPGHKTFICGRPKA
CQFLQKSLLCARKMKTVEVCGFTEEAVYEYVSKFFKNENEKSDRLIKQLE
VSDNLKQMCTIPVFLWTVCHIFNEEIIPTNLETITEIYFYSWLVFLRNHF
RIADSSDCLDFYSIVSSQKILRSIYILMKLSTKLYMENKVLFTAKEFEGI
QFDFDLEKTGFITRFEGGALKEPTYQFAHLVFQEFLTGVFIWITKSTSKY
LSNRELTSCLPTVLGIQRMLNNKENDLFVTFIYNIDQSFRDIPKTAREKA
QDTYNRFRFKRYITKTMELPSCMIQKQTVVIDMKDTKCTDFLALYFEARF
DINNIHRFNNFLLKGLKQFHDTFDKRNAHYFVAQHKLPARLPPACKVLDT
LLEFDDENNDFVYWLGFLYEGDYCIDKTKLPTNLKFEGDFCDPYSIYTTW
LYFLTQITKIESTSLPSDLVL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037150	XLOC_037150	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00058987	TCONS_00058987	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007111	NACHT_NTPase
IPR027417	P-loop_NTPase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 200..234
None	No IPR available	COILS	Coil	Coil	coord: 256..290
None	No IPR available	PFAM	PF05729	NACHT	coord: 468..638 e-value: 8.5E-18 score: 64.7
None	No IPR available	GENE3D	1.20.5.50		coord: 157..293 e-value: 1.2E-11 score: 44.0
IPR007111	NACHT nucleoside triphosphatase	PROSITE	PS50837	NACHT	coord: 467..600 score: 14.279
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 450..682

Blast

[Close]

BLAST of TCONS_00058987-protein vs. Swiss-Prot (Human)
Match: NOD2 (Nucleotide-binding oligomerization domain-containing protein 2 OS=Homo sapiens GN=NOD2 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.823e-20
Identity = 101/382 (26.44%), Postives = 174/382 (45.55%), Query Frame = 0

Query:  456 VAMNELF----RINDEI--VVARGVGGSGKTSLVEMYNLKWAKGELNTDFQ-IEFMFTFACRELNNLVNNKTTLEELFK-TCYPEVFELITLDDLRNLGSRVMIILDGMDELHNIY---EQNKSLITMSHVH-IVRKLIDPNFIPGHKTFICGRPKACQ-FLQKSLLCARKMKTVEVCGFTEEAVYEYVSKFFKNENEKSDRLIKQLEVSDNLKQMCTIPVFLWTV--CH---IFNEEIIPTNLETITEIYFYSWLVFLRNHFRIADSSDCLDFYSIVSSQKILRSIYILMKLSTKLYMENKVL---------FTAKEFEGIQFDFDLEKTGFITRFEGGALKEPT-YQFAHLVFQEFLTGVFIWITKSTSKYLSNRELTSC 809
            + + ELF     +ND+   V+  G  GSGK++L++  +L WA G+   DFQ   F+F F+CR+L  +    +    LF+  C+P+V +      L +   RV++  DG DE    +   E++ S    + V  ++  L+  N +   +  +  RP A   FL+K +     +K     GF+E+ +  Y+ K   +E   +DRLI+ L+ +  L  +C +PVF W V  CH   +  E   P   +T T++Y    L+ L++    A   D        S+ + L    +  +L T L++    L         F+A++ +  Q   D    GF+ R +G         +F H+ FQ F    ++ ++      L  R L +C
Sbjct:  276 LGLEELFSTPGHLNDDADTVLVVGEAGSGKSTLLQRLHLLWAAGQ---DFQEFLFVFPFSCRQLQCMAKPLSVRTLLFEHCCWPDVGQEDIFQLLLDHPDRVLLTFDGFDEFKFRFTDRERHCSPTDPTSVQTLLFNLLQGNLLKNARKVVTSRPAAVSAFLRKYIRTEFNLK-----GFSEQGIELYLRK-RHHEPGVADRLIRLLQETSALHGLCHLPVFSWMVSKCHQELLLQEGGSP---KTTTDMY----LLILQHFLLHATPPD--------SASQGLGPSLLRGRLPTLLHLGRLALWGLGMCCYVFSAQQLQAAQVSPDDISLGFLVRAKGVVPGSTAPLEFLHITFQCFFAAFYLALSADVPPALL-RHLFNC 632

The following BLAST results are available for this feature:

BLAST of TCONS_00058987-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00058987-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NOD2	3.823e-20	26.44	Nucleotide-binding oligomerization domain-containi...	[more]

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TCONS_00058987-protein (polypeptide) - C. hemisphaerica