TCONS_00059084-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059084-protein
Unique NameTCONS_00059084-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length898

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059084-protein ID=TCONS_00059084-protein|Name=TCONS_00059084-protein|organism=Clytia hemisphaerica|type=polypeptide|length=898bp
GIMANNSLNYSPEISKSFTGMTKKHSLQEETHIHLLRSVSEDPGRPSSFD
DLKFTMESDKEDTLTKSAEQITMPRESDSNSGVGGFSNKFNPFKPKDMAT
AVTLFKHRWLHTFAPNSINSTGHQENNTLKDSSLDDLTIGNYSKTGSIEE
ATLAGSDPRNKLFDLSKDDVKDDSTVTTMSSSKKSRSSLEHTLLATNEQE
QIDRGYLMLPNSTLKLDSVSHASVRQETWTGTLKGVDWKSLCFPACLPLT
IHYFPDHKTLTDQYVEYNYNIVIDEDFVPGSIGTKTKDLKENKFDHTELP
PEEKFMEMISQRISRGFQFVTDPSAIRILKLPDKSLQSMDFNYNRSYVLS
IGTTIHCLRMLGEQIQVTRYSIRDPVIPKPVTYKYNMWPYNCPQFSKGCT
EFSYETPNNYAWNSVDRYICDTGKDFNEVRDILEIMKYWRSRFLLLPVKK
TDLNPTVKEDKRTHHADHMLKIEGFLRFLENVNKIKRNYTSRPLFQTRSN
LKRRKVSNERRNATPERPERKESRSSISSSDKRTSPIQIETQENKDKDSS
ASSASRSSYTNASSNKLPPSEMPPEHILSLHSPHHEIIKAMKSQEYGLTF
VPKQDLLCEYTFISAEAVAWMMKSIDGCHTKEDALVLGQAMLEAKVILHA
SESSRQTFADGFYLYFIKQEKKEEESEKRRFWFNQKQTEDEMLDLYNIKW
IEVAVWRDKYVSDKFLHDPLPPDLTYKLRKPSDGAVFRSSSIPLYKKMEY
NPDINQKSSRSEWCVIAYNGNYYPNQAAYALEVNWLVASGPIIADMVQKW
SHRASSCGFHLVPAPMCVFPRHSIRCSRNPFRKNPFIPLNLKCLLKPGQE
RLFDNYDSKTWSRRMIYFQESILYKYKHFQFRSFKCTLSMYTHTNRSQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037208XLOC_037208Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059084TCONS_00059084Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000591DEP_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0035556intracellular signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000591DEP domainSMARTSM00049DEP_3coord: 594..669
e-value: 2.8E-10
score: 50.1
IPR000591DEP domainPFAMPF00610DEPcoord: 607..665
e-value: 1.3E-9
score: 37.9
IPR000591DEP domainPROSITEPS50186DEPcoord: 609..668
score: 11.733
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 580..678
e-value: 4.7E-12
score: 45.0
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 584..671
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..191

Blast
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BLAST of TCONS_00059084-protein vs. Swiss-Prot (Human)
Match: DEPD5 (GATOR complex protein DEPDC5 OS=Homo sapiens GN=DEPDC5 PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 2.221e-44
Identity = 100/313 (31.95%), Postives = 165/313 (52.72%), Query Frame = 0 
Query:  586 EIIKAMKSQEYGLTFVPKQDLLCEYTFISAEAVAWMMKSIDGCHTKEDALVLGQAMLEAKVILHASESSRQTFADGFYLYFIKQEKKEEESEKRRFWFNQKQTEDEMLDLYNIKWIEVAVWRDKYVSDKFLHDPLPPDLTYKL-RKP-----------------SDGAVFRSSSIPLYKKMEYNPDINQKSSRSEWCVIAYNGNYYPNQAAYALEVNWLVASGPIIADMVQKWSHRASSCGFHLVPAPMCVFPRHSIRCSRNPFRKNPFIPLNLKCLLKPGQERLFDNYDSKTWSRRMIYFQESILYKYKHFQ 880
            EI++AMK    G+  + +Q  L  Y FISAE V W++  ++G  T+  A+ + Q MLE ++I HAS  + +TF  GFY Y I  +K+ +    ++          +    +  KW EVA     +V+++ +H  +P  L   L  +P                 S  A   ++++P  + +  + D+N ++ R EWC   Y+GN+  N AA+ ++++W+  +  ++ +MVQ W  +A+SCGF LVP     F   S     +P R   FIPLN+ CLLK G E LFD+++ +T+  RM  FQE+I +++   Q
Sbjct: 1179 EILEAMKHPSTGVQLLSEQKGLSPYCFISAEVVHWLVNHVEGIQTQAMAIDIMQKMLEEQLITHASGEAWRTFIYGFYFYKIVTDKEPDRVAMQQPATTWHTAGVDDFASFQRKWFEVA-----FVAEELVHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLN-AAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYG-DPLRAQLFIPLNISCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQ 1484

HSP 2 Score: 134.806 bits (338), Expect = 4.992e-32
Identity = 134/490 (27.35%), Postives = 217/490 (44.29%), Query Frame = 0 
Query:   32 HIHLLR-SVSEDPGRPSSFDDLKFTMESDKEDTLTKSAEQITMPRESDSNSGVGGFSNK---FNPFKPKDMATAVTLFKHRWLHTF--APNS----INSTGHQENNTLKDSSLDDLTIGNYSKTGSIE----EATLAGSDPRNKLFDLSKDDVK--DDSTVTTMSSSKKSRSSLEHTLLATNEQEQIDRGYLMLPNSTLKLDSVSHASVRQETWTGTLKGVDWKSLCFPACLPLTIHYFPDHKTLTDQYVEYNYNIVIDEDFVPGSIGTKTKDLKENKFDHTELPPEEKFMEMISQRISRGFQFVTDPSAIRILKLPDKSLQSMDFNYNRS------------YVLSIGTTIHCLRMLGEQIQVTRYSIRDPVIPKPVTYKYNMWP-YNCPQFSKGCTEFSYETPNNYAWNSVDRYICDTG-KDFNEVRDILEIMKYWRSRFLLLP--------VKKTDLNPTVKEDKRTHHADHMLKIEGFLRFLENVN 483
            H HL +  VS   G  S+ D L+  ME  + D+       +    ES  +   GG++ +    NPF P  M   +T  + RW+HTF   P+     I+    Q    L+ S   D T   +S    +E    EA    S+ R     +S  +    ++ +V  +S+S    +        T  ++ ++      P+  L L     A      +  T+ GVDWKSL  PACLPLT  YFPD + L + Y E  Y+++ +             D+     D  ++  ++ F E I QR+ +G+Q +  P   +        L S    Y+R             Y LS+G T H + +  + I VTRY  + P     + Y Y++ P ++  +F     EFS+E    Y WN +D+YIC  G +DF+    ++E +K+WR+RFLLLP        + + + +  +  D+     D    ++GF+RF+E +N
Sbjct:  537 HPHLHQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVG-SAESMLHVRPGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDPT---HSSAELLELAYHEAAGRHSNSRQPGDGMSFLNFSGTEELSVGLLSNSGAGMNP------RTQNKDSLEDSVSTSPDPILTLS----APPVVPGFCCTV-GVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPE------------ADIDRRDEDGVQMTAQQVFEEFICQRLMQGYQIIVQPKTQKPNPAVPPPLSSSPL-YSRGLVSRNRPEEEDQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSEFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFS----LIESLKFWRTRFLLLPACVTATKRITEGEAHCDIYGDRPRADEDEWQLLDGFVRFVEGLN 994
The following BLAST results are available for this feature:
BLAST of TCONS_00059084-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DEPD52.221e-4431.95GATOR complex protein DEPDC5 OS=Homo sapiens GN=DE... [more]
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