TCONS_00059114-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059114-protein
Unique NameTCONS_00059114-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length334

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059114-protein ID=TCONS_00059114-protein|Name=TCONS_00059114-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MMIRKVSIFCCFLYLIGFGYSLPILKNATREEIKRKDLLPPDHIAGAHME
QDGHINKDYHREVFLGKLVKEGVLVWENMAGYKKLIKVFDEVDKSNDRQI
DKEEMKNWIHDRIMEHYNAATEESNKIFGKVDHDQNGLVAWPEYKAQILG
LNPKDYEKDNLTVIEDKSGQFEKEIQHWLKADFNGDKVLDKNEFLAFYHP
EHNKKTIELMVKEMLSSFDKDNDHIITLEEFTALPPGEVDPEEADEDKLY
QEEKAKEFKRDMDLNSDGKVGKEELMQYLDPRNKEHAVKEAEFLIRSSDR
NRDGKISEHEMLMSYSIFTGSSLTNFAQVLHDEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037233XLOC_037233Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059114TCONS_00059114Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 332..334
NoneNo IPR availableGENE3D1.10.238.10coord: 98..134
e-value: 9.7E-8
score: 31.6
NoneNo IPR availableGENE3D1.10.238.10coord: 222..319
e-value: 1.0E-10
score: 40.9
NoneNo IPR availableGENE3D1.10.238.10coord: 190..221
e-value: 2.5E-9
score: 36.3
coord: 47..97
e-value: 0.0079
score: 15.5
NoneNo IPR availableGENE3D1.10.238.10coord: 135..189
e-value: 4.9E-5
score: 22.7
IPR002048EF-hand domainSMARTSM00054efh_1coord: 210..238
e-value: 4.1
score: 12.8
coord: 84..112
e-value: 0.31
score: 20.1
coord: 290..318
e-value: 3.8
score: 13.1
coord: 254..282
e-value: 17.0
score: 7.8
coord: 174..201
e-value: 52.0
score: 3.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 84..145
e-value: 5.2E-8
score: 33.1
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 261..277
e-value: 0.023
score: 14.1
coord: 299..311
e-value: 0.088
score: 12.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 80..115
score: 10.72
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 250..285
score: 9.855
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 286..321
score: 10.022
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 206..241
score: 9.994
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 178..204
score: 7.233
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 119..154
score: 7.149
IPR002048EF-hand domainCDDcd00051EFhcoord: 254..313
e-value: 2.29694E-6
score: 43.3053
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 299..311
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 132..144
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 263..275
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 219..231
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 182..194
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 93..105
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 171..331
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 83..153

Blast
[Close]
BLAST of TCONS_00059114-protein vs. Swiss-Prot (Human)
Match: CAB45 (45 kDa calcium-binding protein OS=Homo sapiens GN=SDF4 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.265e-63
Identity = 122/347 (35.16%), Postives = 197/347 (56.77%), Query Frame = 0 
Query:    6 VSIFCCFLYLIGF-----GYSLPILKNATREEIKRKD---LLPPDHIAGAHMEQDGHINKDYHREVFLGKLVKEGVLVWENMAGYKKLIKVFDEVDKSNDRQIDKEEMKNWIHDRIMEHYNAATEESNKIFGKVDHDQNGLVAWPEYKAQIL---GLNPKDYE-----KDNLTVIEDKSGQFEKEIQHWLKADFN-GDKVLDKNEFLAFYHPEHNKKTIELMVKEMLSSFDKDNDHIITLEEFTALPPGEVDPEEA-DEDKLYQEEKAKEFKRDMDLNSDGKVGKEELMQYLDPRNKEHAVKEAEFLIRSSDRNRDGKISEHEMLMSYSIFTGSSLTNFAQVLHDEF 334
            + +  C L+L+G        + P   ++TRE +  ++   +LPPDH+ G  +E DGH+N+ +H+EVFLGK +       E     +KL+ +F +VD + DR+I  +EM+ WI ++  EH+  A EES   F  VD D +G V+W EYK + L   G + K+        + L V E+     E     W +AD    D +L + EFL+F HPEH++  +  MVKE++   D+D D  +++ EF +LP G V+ ++  D D  + +++ KEF+  +D N DG V  EEL  Y+DP N+ +A+ EA+ +I  +D N++  +   E+L     FTGS L ++A+ +H+EF
Sbjct:   16 IGLAPCCLWLLGAVLLMDASARPANHSSTRERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHLEPEEVLKYSEFFTGSKLVDYARSVHEEF 362
The following BLAST results are available for this feature:
BLAST of TCONS_00059114-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAB459.265e-6335.1645 kDa calcium-binding protein OS=Homo sapiens GN=... [more]
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