TCONS_00059164-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059164-protein
Unique NameTCONS_00059164-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length150

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059164-protein ID=TCONS_00059164-protein|Name=TCONS_00059164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
MSGLPPGWIEKTSNSTGKKYYYNTQTQQSQWEKPTDDDVKSVRASHLLVK
HNESRRPASWRQDKITRSKDEAYEIIAGYRKRITSGEISLEDLAQTESDC
SSAKKGGDLGFFYPGQMQKPFEDATFALEVGELSEAISTDSGIHLILRTG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037261XLOC_037261Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059164TCONS_00059164Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR000297PPIase_PpiC
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016853isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016853 isomerase activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 3..36
e-value: 9.7E-13
score: 58.3
IPR001202WW domainPFAMPF00397WWcoord: 4..34
e-value: 6.7E-14
score: 51.6
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 8..34
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 2..36
score: 14.954
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 3..35
NoneNo IPR availableGENE3D3.10.50.40coord: 32..150
e-value: 1.9E-34
score: 118.3
NoneNo IPR availableGENE3D2.20.70.10coord: 2..31
e-value: 1.4E-13
score: 50.1
NoneNo IPR availableCDDcd00201WWcoord: 5..36
e-value: 3.83675E-11
score: 53.3006
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 41..149
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 46..148
e-value: 2.7E-21
score: 76.2
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 39..150
score: 26.188

Blast
[Close]
BLAST of TCONS_00059164-protein vs. Swiss-Prot (Human)
Match: PIN1 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo sapiens GN=PIN1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.064e-60
Identity = 90/156 (57.69%), Postives = 112/156 (71.79%), Query Frame = 0 
Query:    4 LPPGWIEKTSNSTGKKYYYNTQTQQSQWEKPTDD----------DVKSVRASHLLVKHNESRRPASWRQDKITRSKDEAYEIIAGYRKRITSGEISLEDLAQTESDCSSAKKGGDLGFFYPGQMQKPFEDATFALEVGELSEAISTDSGIHLILRT 149
            LPPGW ++ S S+G+ YY+N  T  SQWE+P+ +          +   VR SHLLVKH++SRRP+SWRQ+KITR+K+EA E+I GY ++I SGE   E LA   SDCSSAK  GDLG F  GQMQKPFEDA+FAL  GE+S  + TDSGIH+ILRT
Sbjct:    7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162
The following BLAST results are available for this feature:
BLAST of TCONS_00059164-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIN12.064e-6057.69Peptidyl-prolyl cis-trans isomerase NIMA-interacti... [more]
back to top