TCONS_00059194-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059194-protein
Unique NameTCONS_00059194-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length190

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059194-protein ID=TCONS_00059194-protein|Name=TCONS_00059194-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MADRPDGYGLTAEVQAHIDGKYDEKLAREAMDWIQSYVPDSGVGGLSDAN
DIQEKLKDGVVLCKLLNALTPYSIKKFNTSKMAFKQMENIGLALAAMENY
GVSKIDLFQTVDLFEGQNMALVITTIHALGRKTGGKGKRGIGPKESQQNK
REFSEEQLRAGEGVIGLQMGTNKFANQSGQNFGKTRAIID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037277XLOC_037277Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059194TCONS_00059194Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
IPR000557Calponin_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 52..67
score: 54.78
coord: 85..101
score: 49.83
coord: 153..166
score: 52.1
coord: 22..35
score: 36.55
coord: 101..116
score: 59.19
coord: 3..17
score: 40.0
coord: 166..181
score: 66.91
coord: 122..136
score: 35.29
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 26..129
e-value: 1.9E-22
score: 90.6
IPR001715Calponin homology domainPFAMPF00307CHcoord: 27..132
e-value: 4.4E-23
score: 81.4
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 15..177
e-value: 1.3E-35
score: 121.8
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 24..133
score: 17.447
IPR001715Calponin homology domainCDDcd00014CHcoord: 28..132
e-value: 4.34807E-25
score: 93.9147
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 17..175
IPR000557Calponin repeatPFAMPF00402Calponincoord: 165..188
e-value: 2.7E-11
score: 42.8
IPR000557Calponin repeatPROSITEPS01052CALPONIN_1coord: 165..183
IPR000557Calponin repeatPROSITEPS51122CALPONIN_2coord: 165..189
score: 11.697
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..155

Blast
[Close]
BLAST of TCONS_00059194-protein vs. Swiss-Prot (Human)
Match: TAGL3 (Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 4.893e-47
Identity = 93/199 (46.73%), Postives = 120/199 (60.30%), Query Frame = 0 
Query:    1 MADRPDGYGLTAEVQAHIDGKYDEKLAREAMDWIQSYVPDSGVGGLSDANDIQEKLKDGVVLCKLLNALTPY---SIKKFNTSKMAFKQMENIGLALAAMENYGVSKIDLFQTVDLFEGQNMALVITTIHALGR----KTGG--KGKRGIGPKESQQNKREFSEEQLRAGEGVIGLQMGTNKFANQSGQN-FGKTRAII 189
            MA+R   YGL+ EVQ  I+ KYD  L  + +DWI     +            Q+ L DG VLCKL+N+L P     I K + SKMAFKQME I   L A E YGV   D+FQTVDL+EG++MA V  T+ ALG     K  G  +G+     +++QQN+R FSEEQLR G+ VIGLQMG+NK A+Q+G   +G  R I+
Sbjct:    1 MANRGPSYGLSREVQEKIEQKYDADLENKLVDWIILQCAEDIEHPPPGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGKDMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNVIGLQMGSNKGASQAGMTGYGMPRQIM 199
The following BLAST results are available for this feature:
BLAST of TCONS_00059194-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAGL34.893e-4746.73Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2[more]
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