TCONS_00059222-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059222-protein
Unique NameTCONS_00059222-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length218

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059222-protein ID=TCONS_00059222-protein|Name=TCONS_00059222-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
MSTKNITKLFDFCRTGNLFDLKNIVEAEEVDVNVRDKWDSTPLYYACLCG
HEKLVEYLLQKGAKCAANTFDGERCLYSALTQNIKKMLKDYKAISKDCIR
RNAYVEFFKRCLSEHTYKDVCFTVHGVNFFAHRLVLSVRSPYFAHMFTTK
WKERNNIRINNQKVTTKAFELLIQYIYTDRMEIPVEELDDIKILLKQCYL
FQAAEKVERMEKEFNFYC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037297XLOC_037297Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059222TCONS_00059222Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 118..215
e-value: 1.1E-10
score: 51.6
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 109..212
e-value: 1.5E-19
score: 70.1
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 118..185
score: 18.762
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 38..67
e-value: 2.6E-4
score: 30.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 38..63
score: 9.217
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 24..87
e-value: 6.6E-7
score: 29.7
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 1..106
e-value: 4.7E-16
score: 58.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 4..89
score: 12.726
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 5..89
NoneNo IPR availableGENE3D3.30.710.10coord: 107..210
e-value: 9.0E-23
score: 80.2
NoneNo IPR availableCDDcd00204ANKcoord: 13..89
e-value: 1.67637E-10
score: 54.3118
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 104..195

Blast
[Close]
BLAST of TCONS_00059222-protein vs. Swiss-Prot (Human)
Match: ABTB1 (Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Homo sapiens GN=ABTB1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.500e-68
Identity = 100/204 (49.02%), Postives = 138/204 (67.65%), Query Frame = 0 
Query:    5 NITKLFDFCRTGNLFDLKNIVEAEEVDVNVRDKWDSTPLYYACLCGHEKLVEYLLQKGAKCAANTFDGERCLYSALTQNIKKMLKDYKAISKDCIRRNAYVEFFKRCLSEHTYKDVCFTVHGVNFFAHRLVLSVRSPYFAHMFTTKWKERNNIRINNQKVTTKAFELLIQYIYTDRMEIPVEELDDIKILLKQCYLFQAAEKVE 208
            + + LF  CR G++  ++ ++E  +V+VNVRDKWDSTPLYYACLCGHE+LV YLL  GA+C ANTFDGERCLY AL+  I++ L+DYK ++  C RR+ Y +F +R L +  + DV F VHG  F  HR VL  RS YFA+M  TKWK ++ + + +  +   AF  L+QY+YT R++I VE + D + L KQC L+     +E
Sbjct:    2 DTSDLFASCRKGDVGRVRYLLEQRDVEVNVRDKWDSTPLYYACLCGHEELVLYLLANGARCEANTFDGERCLYGALSDPIRRALRDYKQVTASCRRRDYYDDFLQRLLEQGIHSDVVFVVHGKPFRVHRCVLGARSAYFANMLDTKWKGKSVVVLRHPLINPVAFGALLQYLYTGRLDIGVEHVSDCERLAKQCQLWDLLSDLE 205
The following BLAST results are available for this feature:
BLAST of TCONS_00059222-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABTB11.500e-6849.02Ankyrin repeat and BTB/POZ domain-containing prote... [more]
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