TCONS_00059307-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059307-protein
Unique NameTCONS_00059307-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length211

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059307-protein ID=TCONS_00059307-protein|Name=TCONS_00059307-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MMPPKKKGKKRSSTESKEDPELNYESATDLLSPSEVVKMRKKTQPATSAT
AEQSPVKDIPKDKDKAIVKKSKTQQKSGKKDKDKSDLEKKKDNKKKEKGD
GKHSEHRKLKGMKEKRKSLKKPSQSGENEDIDLSSVIYPCGVCNKEVVDS
DEAILCEAGCEFWYHTKCAGMTDVAYLLLTKEDHAEWVCDKCIASKSVRL
VKTKSVLETSP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037351XLOC_037351Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059307TCONS_00059307Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 139..193
e-value: 3.6E-7
score: 39.8
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 140..193
e-value: 5.6E-9
score: 35.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 137..195
score: 9.552
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 134..199
e-value: 1.4E-11
score: 43.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..128
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 140..192
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 137..204

Blast
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BLAST of TCONS_00059307-protein vs. Swiss-Prot (Human)
Match: PYGO1 (Pygopus homolog 1 OS=Homo sapiens GN=PYGO1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.499e-24
Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 0 
Query:   95 KKEKGDGKHSEHRKLKGMKE------KRKSLKKPSQSGENEDIDLSSVIYPCGVCNKEVVDSDEAILCEAGCEFWYHTKCAGMTDVAYLLLTKEDHAEWVCDKCIASKSVRLVKTKSVLETS 210
                 +G  ++ R+ +G  +        KS   P++ G +     S  +YPCG+C  EV D  +AILCEA C+ W+H  C GMT+ AY LLT E  A W CD C+A K V+L++T+     S
Sbjct:  296 NNNPANGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSS----SDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPS 413
The following BLAST results are available for this feature:
BLAST of TCONS_00059307-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PYGO11.499e-2437.70Pygopus homolog 1 OS=Homo sapiens GN=PYGO1 PE=1 SV... [more]
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