TCONS_00059797-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059797-protein
Unique NameTCONS_00059797-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1008

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059797-protein ID=TCONS_00059797-protein|Name=TCONS_00059797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1008bp
MALTSAAGIIALLDENEHELKHYALKKLDGIVEEFWAEISDVITKIEELC
ENEGFRHRDLSSLIASKVYYHLGAFEDSVMYALGAGDLFNVNGHSEYVET
IIAKCIDMYTKSRVKMAENPSEPVNIDERLIAVVNKMFQRCFEDKKYKQA
IGIALETRRLDVFEEAILKSEDIHGMLGYSLNICMTLIESLSFRNKILRV
LVKLYLNLATPDHISVSQCLIFLDDPDSVADIMEKLIKTSENQTLMAYQI
AFDLYENASQQFLAGIRNVLRALAPIALEEPVKQGDAPAKTDSSDEKPME
TDATEGGEDKKEENAETKDKEETKPQKTEKDLSEVEKTLQDRVVNLNGIL
SGDTTIKLHLEFLIRNNHADLLILKNTKDIVRNSICHSATVISNAFMHSG
TTSDTFLRNNLDWLSRATNWAKFTATASLGVIHKGHEKESLKLMGSYLPK
DGSSNSTYQEGGGLYALGLIHANHGESIKEYLLNQLKNATTDMVRHGGCL
GLGLAAMGTQQNDIYEQLKFNLYQDDAVTGEAAGIAMGLVMLGSKSSQAI
DDMVMYAQETQHEKILRGLAIGIALVMYGRMEEADALIETLMKDKDAILR
RSAMYTLAMAYAGTGNNKAIRTILHVAVSDVNDDVRRAAVQSLGFLLFRT
PEQVPSVVSLLSESYNPHVRCGAAMALGIACAGTGSKEAIALIEPLMKDP
VNYVRQYALIASALIAIQQTEVTCPKVKQIREAYKKTISDKHEDSIAKFG
AILAQGIIDAGGRNATVSLQSRAGQNHMPSIVGLFIFSQFWYWFPLSHFL
SLAFTPTCIIGLNSNLKMPKIQFRSNAKPSMYAYPELLQPPKKEEKEKVS
TAVLSITAKKAKQKKESKDDDAMEVDDTKSTSKKEEKNEANKTSEKDVDE
SEKQTSNDSKKDSTDKESEEKKKEPDFEMIDNPARVMPAQLKKLTLPADC
RYSPVKSVINGGVIVMRDLKETEPEDLIEPLPASATVPGAEDEGDEPEPP
EPFEYTEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037620XLOC_037620Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059797TCONS_00059797Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR01664226S_Psome_Rpn2
IPR002015Proteasome/cyclosome_rpt
IPR016024ARM-type_fold
Vocabulary: Cellular Component
TermDefinition
GO:0000502proteasome complex
Vocabulary: Biological Process
TermDefinition
GO:0042176regulation of protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042176 regulation of protein catabolic process
cellular_component GO:0000502 proteasome complex
molecular_function GO:0005488 binding
molecular_function GO:0030234 enzyme regulator activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 581..601
NoneNo IPR availableCOILSCoilCoilcoord: 884..904
NoneNo IPR availableGENE3D1.10.601.10coord: 770..998
e-value: 3.4E-4
score: 19.9
NoneNo IPR availablePFAMPF13646HEAT_2coord: 624..711
e-value: 1.7E-13
score: 50.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 974..1008
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 858..933
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..334
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 360..743
e-value: 9.6E-42
score: 142.2
IPR01664226S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitPIRSFPIRSF01594726S_protsm_Rpn2coord: 1..1008
e-value: 0.0
score: 1373.0
IPR002015Proteasome/cyclosome repeatPFAMPF01851PC_repcoord: 462..493
e-value: 1.9E-4
score: 21.6
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 19..74
coord: 195..238
coord: 404..758

Blast
[Close]
BLAST of TCONS_00059797-protein vs. Swiss-Prot (Human)
Match: PSMD1 (26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2)

HSP 1 Score: 1252.65 bits (3240), Expect = 0.000e+0
Identity = 632/985 (64.16%), Postives = 768/985 (77.97%), Query Frame = 0 
Query:    3 LTSAAGIIALLDENEHELKHYALKKLDGIVEEFWAEISDVITKIEELCENEGFRHRDLSSLIASKVYYHLGAFEDSVMYALGAGDLFNVNGHSEYVETIIAKCIDMYTKSRVKMAENP-SEPVNIDERLIAVVNKMFQRCFEDKKYKQAIGIALETRRLDVFEEAILKSEDIHGMLGYSLNICMTLIESLSFRNKILRVLVKLYLNLATPDHISVSQCLIFLDDPDSVADIMEKLIKTSENQTLMAYQIAFDLYENASQQFLAGIRNVLRALA-PIALEEPVKQGDAPAKTDSSDEKPMETDATEGGEDKKEENAETKDKEETKPQKTEKDLSEVEKTLQDRVVNLNGILSGDTTIKLHLEFLIRNNHADLLILKNTKDIVRNSICHSATVISNAFMHSGTTSDTFLRNNLDWLSRATNWAKFTATASLGVIHKGHEKESLKLMGSYLPKDGSSNSTYQEGGGLYALGLIHANHGESIKEYLLNQLKNATTDMVRHGGCLGLGLAAMGTQQNDIYEQLKFNLYQDDAVTGEAAGIAMGLVMLGSKSSQAIDDMVMYAQETQHEKILRGLAIGIALVMYGRMEEADALIETLMKDKDAILRRSAMYTLAMAYAGTGNNKAIRTILHVAVSDVNDDVRRAAVQSLGFLLFRTPEQVPSVVSLLSESYNPHVRCGAAMALGIACAGTGSKEAIALIEPLMKDPVNYVRQYALIASALIAIQQTEVTCPKVKQIREAYKKTISDKHEDSIAKFGAILAQGIIDAGGRNATVSLQSRAGQNHMPSIVGLFIFSQFWYWFPLSHFLSLAFTPTCIIGLNSNLKMPKIQFRSNAKPSMYAYPELLQPPKKEEKEKVSTAVLSITAKKAKQKKESKDDDA--MEVDDTKSTSKKEEKNEANKTSEKDVDESEKQTSNDSKKDSTDKESEEKKKEPDFEMIDNPARVMPAQLKKLTLPADCRYSPVKSVINGGVIVMRDLKETEPEDLIEPLPA 983
            +TSAAGII+LLDE+E +LK +AL KL+ +V +FWAEIS+ + KIE L E+EGFR R  ++L+ASKV+YHLGAFE+S+ YALGAGDLFNVN +SEYVETIIAKCID YTK  V+ A+ P  E   ID+RL  +VNKMFQRC +D KYKQAIGIALETRRLDVFE+ IL+S D+ GML YSL +CM+L+++  FRNK+LRVLVK+Y+NL  PD I+V QCLIFLDDP +V+DI+EKL+K  E+  LMAYQI FDLYE+ASQQFL+ +   LR +  PIA          P  T++      E D+     ++K  +A      E  P+  ++ L  ++            ILSG+  I+LHL+FLIRNN+ DL+ILKNTKD VRNS+CH+ATVI+N+FMH GTTSD FLR+NL+WL+RATNWAKFTATASLGVIHKGHEKE+L+LM +YLPKD S  S YQEGGGLYALGLIHANHG  I +YLLNQLKNA+ D+VRHGG LGLGLAAMGT + D+Y+ LK NLYQDDAVTGEAAG+A+GLVMLGSK++QAI+DMV YAQETQHEKILRGLA+GIALVMYGRMEEADALIE+L +DKD ILRRS MYT+AMAY G+GNNKAIR +LHVAVSDVNDDVRRAAV+SLGF+LFRTPEQ PSVVSLLSESYNPHVR GAAMALGI CAGTG+KEAI L+EP+  DPVNYVRQ ALIASALI IQQTE+TCPKV Q R+ Y K I+DKH+D +AKFGAILAQGI+DAGG N T+SLQSR G  HMPS+VG+ +F+QFW+WFPLSHFLSLA+TPTC+IGLN +LKMPK+Q++SN KPS +AYP  L+ PK++EKEKVSTAVLSITAK  K++KE +  +   MEVD+ +   +KE+K E                                    +F+++DNPARVMPAQLK LT+P  CRY P K +  GG+I+++D  E + E+L+EP+ A
Sbjct:    2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK--EDNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIA--------SVPGSTNTGTVPGSEKDSDSMETEEKTSSAFVGKTPEASPEPKDQTLKMIK------------ILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEP---------------------------------NFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSE-DIEELVEPVAA 930
The following BLAST results are available for this feature:
BLAST of TCONS_00059797-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSMD10.000e+064.1626S proteasome non-ATPase regulatory subunit 1 OS=... [more]
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