TCONS_00059798-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059798-protein
Unique NameTCONS_00059798-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length295

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059798-protein ID=TCONS_00059798-protein|Name=TCONS_00059798-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
MLKMATLRNLHQSIKSKISIQQFKRQLSVTVYCHQEFLRTSIKDDEKGIR
RITLDDTKKRNALSLAMLDELKQHLQDVNMNESVKVVVLCHTGSVFSAGH
DLKELLDETGSKFHSQIFNRCTEVMNLVQDIDVPVIAEVRGVATAAGCQL
VATCDLAICSDTSKFAVPGVLIGLFCSTPAVALARAVNRKQALKMLLTGD
PINAKEALDCGLVNKTVPIEDVEKTTQELAERITRHSSRVIGLGKKTFYQ
QIKENRDEAYCITGNVMVDNLTYEDAQEGIRAFFEKRQPEWQNNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037621XLOC_037621Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059798TCONS_00059798Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014748Crontonase_C
IPR001753Crotonase_core_superfam
IPR029045ClpP/crotonase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014748Crontonase, C-terminalGENE3D1.10.12.10coord: 252..295
e-value: 2.6E-11
score: 43.0
NoneNo IPR availableGENE3D3.90.226.10coord: 42..251
e-value: 3.2E-58
score: 196.2
NoneNo IPR availableCDDcd06558crotonase-likecoord: 44..233
e-value: 4.24525E-64
score: 201.25
IPR001753Crotonase superfamilyPFAMPF00378ECH_1coord: 46..293
e-value: 4.0E-56
score: 190.0
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 44..293

Blast
[Close]
BLAST of TCONS_00059798-protein vs. Swiss-Prot (Human)
Match: ECHD3 (Enoyl-CoA hydratase domain-containing protein 3, mitochondrial OS=Homo sapiens GN=ECHDC3 PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 2.608e-90
Identity = 131/247 (53.04%), Postives = 176/247 (71.26%), Query Frame = 0 
Query:   48 GIRRITLDDTKKRNALSLAMLDELKQH-LQDVNMNESVKVVVLCHTGSVFSAGHDLKELLDETGSKFHSQIFNRCTEVMNLVQDIDVPVIAEVRGVATAAGCQLVATCDLAICSDTSKFAVPGVLIGLFCSTPAVALARAVNRKQALKMLLTGDPINAKEALDCGLVNKTVPIEDVEKTTQELAERITRHSSRVIGLGKKTFYQQIKENRDEAYCITGNVMVDNLTYEDAQEGIRAFFEKRQPEWQN 293
            GIR I L + KKRNALSLAML  L+   L D + N+ +KV+++   G VFS+GHDLKEL +E G  +H+++F  C++VM  +++  VPVIA V G+A AAGCQLVA+CD+A+ SD S FA PGV +GLFCSTP VALARAV RK AL+ML TG+PI+A+EAL  GL++K VP  ++++ T  +A +I   S  V+ LGK TFY+Q+ ++   AY +T   MVDNL   D QEGI AF +KR+P W +
Sbjct:   55 GIRNIVLSNPKKRNALSLAMLKSLQSDILHDADSND-LKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLAAAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVWSH 300
The following BLAST results are available for this feature:
BLAST of TCONS_00059798-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ECHD32.608e-9053.04Enoyl-CoA hydratase domain-containing protein 3, m... [more]
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