TCONS_00059858-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059858-protein
Unique NameTCONS_00059858-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length194

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059858-protein ID=TCONS_00059858-protein|Name=TCONS_00059858-protein|organism=Clytia hemisphaerica|type=polypeptide|length=194bp
ANSIILLVNYYNHTLLFSAILILEEKLKLPQEHSNISRVCLPDTRAPISD
DQTCYIVGYGFTTFNGNKSDDLRHSKINLVPVDTCNQAKSFNNTVDENMT
ICAGDGTAKISPCNTDSGGSLVCQANGTWYAQGIVSSGYKCGGQDAYSLY
TRISNYNDWIAKEIFEYYSSSGRTLKPCVLLMMIISYVTFVFLI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037648XLOC_037648Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059858TCONS_00059858Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001254Trypsin_dom
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 6..160
e-value: 2.8E-7
score: 24.9
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 30..160
e-value: 4.0E-29
score: 101.9
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 19..165
score: 15.755
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 19..162
e-value: 2.06799E-41
score: 140.489
NoneNo IPR availableGENE3D2.40.10.10coord: 3..51
e-value: 1.8E-4
score: 20.8
NoneNo IPR availableGENE3D2.40.10.10coord: 52..171
e-value: 7.8E-35
score: 119.3
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 19..164

Blast
[Close]
BLAST of TCONS_00059858-protein vs. Swiss-Prot (Human)
Match: TM11F (Transmembrane protease serine 11F OS=Homo sapiens GN=TMPRSS11F PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.114e-23
Identity = 55/163 (33.74%), Postives = 80/163 (49.08%), Query Frame = 0 
Query:    2 NSIILLVNYYNHTLLFSAILILEEKLKLPQEHSNI-SRVCLPDTRAPISDDQTCYIVGYGFTTFNGNKSDDLRHSKINLVPVDTCNQAKSFNNTVDENMTICAGDGTAKISPCNTDSGGSLVCQANGTWYAQGIVSSGYKCGGQDAYSLYTRISNYNDWIAKE 163
              IIL  NY+  T      L+   +L    E SNI  RVCLPD+   +    + ++ G+G    +G   + LR +++  +  D CN+   ++  +   M +CAG    KI  C  DSGG LV   +  WY  GIVS G  C       +YTR++ Y DWIA +
Sbjct:  277 RKIILHENYHRETNENDIALV---QLSTGVEFSNIVQRVCLPDSSIKLPPKTSVFVTGFGSIVDDGPIQNTLRQARVETISTDVCNRKDVYDGLITPGM-LCAGFMEGKIDACKGDSGGPLVYDNHDIWYIVGIVSWGQSCALPKKPGVYTRVTKYRDWIASK 435
The following BLAST results are available for this feature:
BLAST of TCONS_00059858-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM11F2.114e-2333.74Transmembrane protease serine 11F OS=Homo sapiens ... [more]
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