TCONS_00059906-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059906-protein
Unique NameTCONS_00059906-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length321

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059906-protein ID=TCONS_00059906-protein|Name=TCONS_00059906-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
MGNTYTLYAAEGMAPPPVDPAPQSPPTSQSILTAVSNNPGVFEDLHKKCK
ELFPVPFDGFRLAINKGLSNHFQVSHTLNLTSAPQGSSYHFGATYVGGSQ
TSPSEAYPVILGDIDNSGSLSAQIIHQFSQRIKGKCVVQSQKQELAMVQF
DADYRGDDFTATCTLGNIDVINESGIIVGHYLQRLTKSLDLGAEILYHYG
QGQESATLSVAGKYTQEKWIGAAQINPGGWHVSYYHKANDNIQVGVDYEY
SSRMQDSCVSLGYQVDVPKANVTYRGLVDTNWTVAGIFEKRLHPLPFSFV
LSGMLNHVKNQCRFGFALQIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037671XLOC_037671Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059906TCONS_00059906Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027246Porin_Euk/Tom40
Vocabulary: Cellular Component
TermDefinition
GO:0005741mitochondrial outer membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0005741 mitochondrial outer membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.160.10coord: 28..321
e-value: 7.2E-68
score: 228.5
NoneNo IPR availableCDDcd07305Porin3_Tom40coord: 38..321
e-value: 8.64518E-130
score: 373.468
IPR027246Eukaryotic porin/Tom40PFAMPF01459Porin_3coord: 38..315
e-value: 1.4E-72
score: 244.3

Blast
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BLAST of TCONS_00059906-protein vs. Swiss-Prot (Human)
Match: TOM40 (Mitochondrial import receptor subunit TOM40 homolog OS=Homo sapiens GN=TOMM40 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 1.167e-107
Identity = 150/284 (52.82%), Postives = 203/284 (71.48%), Query Frame = 0 
Query:   38 NPGVFEDLHKKCKELFPVPFDGFRLAINKGLSNHFQVSHTLNLTSAPQGSSYHFGATYVGGSQTSPSEAYPVILGDIDNSGSLSAQIIHQFSQRIKGKCVVQSQKQELAMVQFDADYRGDDFTATCTLGNIDVINESGIIVGHYLQRLTKSLDLGAEILYHYGQGQESATLSVAGKYTQEKWIGAAQINPGGWHVSYYHKANDNIQVGVDYEYSSRMQDSCVSLGYQVDVPKANVTYRGLVDTNWTVAGIFEKRLHPLPFSFVLSGMLNHVKNQCRFGFALQIG 321
            NPG FE+ H+KCKELFP+  +G +L +NKGLSNHFQV+HT+ L++  + S+YHFG TYVG  Q SP+EA+PV++GD+DNSGSL+AQ+IHQ    ++ K  +Q+Q+ +    Q D +YRG DFTA  TLGN DV+  SGI+V HYLQ +T  L LG E++YH   G+E   +S+AGKYT   W+    +   G H +YYHKA+D +QVGV++E S+RMQD+ VS GYQ+D+PKAN+ ++G VD+NW V    EK+L PLP +  L   LNH KN+ + GF L IG
Sbjct:   79 NPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVALSTIGE-SNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTIG 361
The following BLAST results are available for this feature:
BLAST of TCONS_00059906-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TOM401.167e-10752.82Mitochondrial import receptor subunit TOM40 homolo... [more]
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