TCONS_00060163-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060163-protein
Unique NameTCONS_00060163-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length302

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060163-protein ID=TCONS_00060163-protein|Name=TCONS_00060163-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MHILLLSIVLLILSLDIKADALANYDDLPRLSKQRNQCIPVEIPQCKRWY
DQRRPPNIYTATTAEYRNVKSLVSQLSLLPKNYRECVNDATFLLCALYSP
VCIKGSKPLKPCRELCVKWRKNCRRLDIFSNVALPDKLRDCNELPEFHNS
MCIQPSSFITKEQEEKKSNKDSSKHKTCDCKDFKQPTPKYRHFRKAAYVI
EATINSRETLANGNTKIILDVLKIYKQGKISIKFGKLRMWSSCLCHKDIQ
YGDKKYFLIVDENHHKKKKNLEISKTTLVLDATQYENKIDKWYKKCLKRK
SC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037853XLOC_037853Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060163TCONS_00060163Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020067Frizzled_dom
IPR018933Netrin_module_non-TIMP
IPR001134Netrin_domain
IPR008993TIMP-like_OB-fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020067Frizzled domainSMARTSM00063FRI_4coord: 37..157
e-value: 1.1E-6
score: 37.0
IPR020067Frizzled domainGENE3D1.10.2000.10coord: 29..159
e-value: 1.4E-16
score: 60.4
IPR020067Frizzled domainPFAMPF01392Fzcoord: 38..148
e-value: 3.1E-14
score: 53.5
IPR020067Frizzled domainPROSITEPS50038FZcoord: 33..155
score: 15.019
IPR020067Frizzled domainSUPERFAMILY63501Frizzled cysteine-rich domaincoord: 37..155
IPR018933Netrin module, non-TIMP typePFAMPF01759NTRcoord: 192..291
e-value: 3.7E-7
score: 29.8
NoneNo IPR availableGENE3D2.40.50.120coord: 172..301
e-value: 5.0E-9
score: 35.6
IPR001134Netrin domainPROSITEPS50189NTRcoord: 178..302
score: 9.919
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 175..295

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060163-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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