TCONS_00061395-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061395-protein
Unique NameTCONS_00061395-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length666

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061395-protein ID=TCONS_00061395-protein|Name=TCONS_00061395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=666bp
MAPSWSKLLEKSPNFTVKNCLLALSLVASTAATVKAITWGRKNSRRGGNK
NLHIPAKKKDGKASVDSAFFKQLMKILKQLIPGPFSAESGYLVLIAFSLV
ARTYCDVYMISITTTIERTIISKNRDGFRRQIMEFFTAMPMVSLVNQLLK
YGISELKLHFRSRLTLKLQKEYLSGMTYYKMSNLDSRIANPDQLLTQDID
KFCDSLVELYSNLTKPILDVFLYVKTLLQTVGYKTPLIMIGYLLVSGAFL
TKLRKPVSRMTAEEQKLEGEFRYVNSRVITNSEEIAFYQGQEREKKTMRE
SFMRLVDHLRDVLNFKFAIGIVDNVIAKYIATVVGFSSVAVFFLGQNDRH
QSMKSFEIMEDYYTTGRIVLRMAEALGRLSLAGREMTKLSGYTTRVVMLM
KVLEDMKANNFVRAQVKNKDEDENSQKEHLSLETAMPSMIMEKDHLIKFE
NVPLVTPNGDVLLKNMSFEVQAGRNVLVCGPNGCGKSSLFRVLGELWPSY
GGSVTKPHAGKLFYVPQRPYMTIGTLRDQVIYPDTIGNMKRKGYNDEHLK
DFLDKVHLGYILEREGGWDSEQDWIDVLSGGEKQRIAMARLFYHKPQFAI
LDECTSAVSVDVEGFMYTHCKEVGITLFTVSHRKSLWKYHEYVLYMDGRG
SFEFKPIEERTEEFGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038522XLOC_038522Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061395TCONS_00061395Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 472..658
e-value: 1.2E-5
score: 34.8
IPR011527ABC transporter type 1, transmembrane domainPFAMPF06472ABC_membrane_2coord: 64..343
e-value: 1.4E-97
score: 326.4
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 163..327
score: 12.158
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 89..335
NoneNo IPR availableGENE3D1.20.1560.10coord: 67..409
e-value: 3.1E-35
score: 121.1
NoneNo IPR availableGENE3D3.40.50.300coord: 410..665
e-value: 1.2E-40
score: 138.9
NoneNo IPR availableCDDcd03223ABCD_peroxisomal_ALDPcoord: 447..652
e-value: 1.11533E-85
score: 267.097
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 463..606
e-value: 2.5E-19
score: 70.0
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 447..666
score: 13.919
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 578..592
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 429..664

Blast
[Close]
BLAST of TCONS_00061395-protein vs. Swiss-Prot (Human)
Match: ABCD3 (ATP-binding cassette sub-family D member 3 OS=Homo sapiens GN=ABCD3 PE=1 SV=1)

HSP 1 Score: 788.104 bits (2034), Expect = 0.000e+0
Identity = 374/615 (60.81%), Postives = 484/615 (78.70%), Query Frame = 0 
Query:   58 KKDGK---ASVDSAFFKQLMKILKQLIPGPFSAESGYLVLIAFSLVARTYCDVYMISITTTIERTIISKNRDGFRRQIMEFFTAMPMVSLVNQLLKYGISELKLHFRSRLTLKLQKEYLSGMTYYKMSNLDSRIANPDQLLTQDIDKFCDSLVELYSNLTKPILDVFLYVKTLLQTVGYKTPLIMIGYLLVSGAFLTKLRKPVSRMTAEEQKLEGEFRYVNSRVITNSEEIAFYQGQEREKKTMRESFMRLVDHLRDVLNFKFAIGIVDNVIAKYIATVVGFSSVAVFFLG-QNDRHQSMKSFEIMEDYYTTGRIVLRMAEALGRLSLAGREMTKLSGYTTRVVMLMKVLEDMKANNFVRAQVKNKDEDENSQKEHLSLETAMPSM--IMEKDHLIKFENVPLVTPNGDVLLKNMSFEVQAGRNVLVCGPNGCGKSSLFRVLGELWPSYGGSVTKPHAGKLFYVPQRPYMTIGTLRDQVIYPDTIGNMKRKGYNDEHLKDFLDKVHLGYILEREGGWDSEQDWIDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGFMYTHCKEVGITLFTVSHRKSLWKYHEYVLYMDGRGSFEFKPIEERTEEFGS 666
            +K+GK   A VD  FF +L++ILK ++P  F  E+GYLVLIA  LV+RTYCDV+MI   T IE  II ++R  F+R ++ F  AMP++SLVN  LKYG++ELKL FR RLT  L +EYL   TYYKM NLD+RIANPDQLLTQD++KFC+S+V+LYSNL+KP LD+ LY+  L   +G + P  M+ YL+VSG FLT+LR+P+ +MT  EQK EGE+RYVNSR+ITNSEEIAFY G +REK+T+   F +LV+HL + + F+F++G +D++IAKY+ATVVG+  V+  FL   + RH      E++EDYY +GR++LRM++ALGR+ LAGREMT+L+G+T R+  LM+VL+D+    + R  V  +++      E + +   +P    I+  D++IKF++VPL TPNGDVL+++++FEV++G NVL+CGPNGCGKSSLFRVLGELWP +GG +TKP  GKLFYVPQRPYMT+GTLRDQVIYPD   + KRKG +D  LK++LD V LG+ILEREGGWDS QDW+DVLSGGEKQR+AMARLFYHKPQFAILDECTSAVSVDVEG++Y+HC++VGITLFTVSHRKSLWK+HEY L+MDGRG++EFK I E T EFGS
Sbjct:   49 EKEGKKERAVVDKVFFSRLIQILKIMVPRTFCKETGYLVLIAVMLVSRTYCDVWMIQNGTLIESGIIGRSRKDFKRYLLNFIAAMPLISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSVVDLYSNLSKPFLDIVLYIFKLTSAIGAQGPASMMAYLVVSGLFLTRLRRPIGKMTITEQKYEGEYRYVNSRLITNSEEIAFYNGNKREKQTVHSVFRKLVEHLHNFILFRFSMGFIDSIIAKYLATVVGYLVVSRPFLDLSHPRHLKSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGKYERTMVSQQEKG----IEGVQVIPLIPGAGEIIIADNIIKFDHVPLATPNGDVLIRDLNFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGRLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDGREDQKRKGISDLVLKEYLDNVQLGHILEREGGWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKQITEDTVEFGS 659
The following BLAST results are available for this feature:
BLAST of TCONS_00061395-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCD30.000e+060.81ATP-binding cassette sub-family D member 3 OS=Homo... [more]
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