TCONS_00061786-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061786-protein
Unique Name	TCONS_00061786-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	722

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061786-protein ID=TCONS_00061786-protein|Name=TCONS_00061786-protein|organism=Clytia hemisphaerica|type=polypeptide|length=722bp
MSSNFIDLTSELEASFSINIWRKEINPFVRFGFLKDSKFEKPFDDLPSDS
ERSGTIQESNPDVQNEQSPKKDDTNIDEEEEFSIRSNNQSYHVEFFNLIL
QKIKNQPDVFDVCFNDTEKNTFRAFKELSPDCQELYVRLFQRKHTWIKEE
KIKYDNINHPSCLKSLTNEGFLQNETSLKKLDEIINLLSLAEARSLIADF
KMGKNNLSKSEIKETLQKNCKKQKTLFGSMEDIVIKKAKKMLGKCVLIEQ
SHSAIFSRMLTLFQMFISLFASDNNNILYHLLQVKIKQIIYTKYEVCNNS
YLKSIFQSRESFTYYAEAVNLSDEFNILVESNLFEDAFVLYTKAFKKLKD
SNIHCREDLPGHLKRYTAYYIFLRICRSSVTVLEKLKKYKEAVELVDFVL
ASPLIHAKHRGELWERKIIDCERHLKNLELAHLSIEEAIKDPMVRGHWQY
VFKQRLSRMEKKSKKKKGTDDNMFELENYKKVPIELLKATALLDTSSAHR
AVFMSPSSSGGNIMSNVENLVLETYKAKGFVGLHHEGSTLMTLYVLLFWD
IIFMNVDGVFLSEYQNAPLDMFTDDFYVKRKDDLDERLHFVYTATKQEIA
EKLTKSWNENYQSNVACCNWSIFPSVQKAIDLTVCLKPKVLGGICEVYAK
DLRSRMSGFPDLILWNLQTKSCKIIEVKGPGDKLSSKQIVWLDILQFLGA
DVSVCHVTGIGSKRKFVATQEV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038770	XLOC_038770	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061786	TCONS_00061786	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014883	VRR_NUC

Vocabulary: **Molecular Function**
Term	Definition
GO:0016788	hydrolase activity, acting on ester bonds

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014883	VRR-NUC domain	SMART	SM00990	VRR_NUC_a_2	coord: 595..709 e-value: 4.4E-23 score: 92.7
IPR014883	VRR-NUC domain	PFAM	PF08774	VRR_NUC	coord: 598..708 e-value: 1.2E-21 score: 76.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..78

Blast

[Close]

BLAST of TCONS_00061786-protein vs. Swiss-Prot (Human)
Match: FAN1 (Fanconi-associated nuclease 1 OS=Homo sapiens GN=FAN1 PE=1 SV=4)

HSP 1 Score: 345.125 bits (884), Expect = 1.632e-105
Identity = 220/687 (32.02%), Postives = 366/687 (53.28%), Query Frame = 0

Query:   66 EQSPKKDDTNIDEEEEFSI------------RSNNQSYHVEFFNLILQKI-KNQPDVFDVCFNDTEKNTFRAFKELSPDCQELYVRLFQRKHTWIKEEKIKYDNI--NHPSCLKSLTNEGFLQNETSLKKLDEIINLLSLAEARSLIADFKMGKNNLSKSEIKETLQKNCKKQKTL-FG----SMEDIVIKKAKKMLGKCVLIEQSHSAIFSRMLTLFQMFISL----FASDNNNILYHLLQVKIKQIIYTKYEVCNNSYLKSIFQSRESFTYYAEAVNLSDEFNILVESNLFEDAFVLYTKA---FKKLKD-SNIHCREDLPGHLKRYTAYYIFLRICRSSVTVLEKLKKYKEAVELVDFVLASPLIHAKHRGELWERKIIDCERHLKNLELAHLSIEEAIKDPMVRGHWQYVFKQRLSRMEKKSKKKKGTDDNMFE------LENYKKVPIELLKATALLDTSSAHRAVFMSPSSSGGN---IMSNVENLVLETYKAKGF-VGLHHEGSTLMTLYVLLFWDIIFMN-VDGVFLSEYQNAPLDMFTDDFYVKRKDDLDERLHFVYTATKQEIAEKLTKSWNENYQSNVACCNWSIFPSVQKAIDLTVCLKPKVLGGICEVYAKDLRSRMSGFPDLILWNLQTKSCKIIEVKGPGDKLSSKQIVWLDILQFLGADVSVCHVTGIGSK 713
            +++P +DD+ ++ +   SI            ++    Y++  F ++L+ + +N+ D+    F++ EK     F +LS   Q+LYVRLFQRK +WIK  K++Y+ I  +    ++ LTN GFLQ E+ L++L E++ LLS  E +SL   F +   N  K ++ +   K  K++    +G     +  +++K+AK + G+ V I +   A+FSR+L LF +  S+     A      L  +L V + ++ +  Y +   ++   IFQ R+    YA A ++  + +  + +  +E+A  L   A   + +LK+  ++ C EDLP  L+ +T  +I+ RI    V +L++L  Y+EAV  ++ +L+  +     RG  W+R  ++  +HLK LE     I E + DP VR   +    QR  R+ +    KK    ++F+      +++ K V I       L       ++VF+  +    +   ++ +VE L L  Y+  GF  G+H EGST  TLY LL WDIIFM+ +  VF +  Q  PLD+ TD F+  R+  L+ RL  ++ A ++ +   +  +W+E      +  +W  F S+Q+A DL  CL   VL G+C   A D R    G PDL++WN Q++  K++EVKGP D+LS KQ++WL  LQ LGA+V VCHV  +G+K
Sbjct:  337 QEAPLQDDSCLNNDIPHSIPLEQGSSCNGPGQTTGHPYYLRSFLVVLKTVLENEDDML--LFDEQEKGIVTKFYQLSATGQKLYVRLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKSLAKTFHLVNPNGQKQQLVDAFLKLAKQRSVCTWGKNKPGIGAVILKRAKALAGQSVRICKGPRAVFSRILLLFSLTDSMEDEDAACGGQGQLSTVLLVNLGRMEFPSYTINRKTH---IFQDRDDLIRYAAATHMLSDISSAMANGNWEEAKELAQCAKRDWNRLKNHPSLRCHEDLPLFLRCFTVGWIYTRILSRFVEILQRLHMYEEAVRELESLLSQRIYCPDSRGRWWDRLALNLHQHLKRLEPTIKCITEGLADPEVRTGHRLSLYQRAVRLRESPSCKKFK--HLFQQLPEMAVQDVKHVTI----TGRLCPQRGMCKSVFVMEAGEAADPTTVLCSVEELALAHYRRSGFDQGIHGEGSTFSTLYGLLLWDIIFMDGIPDVFRNACQAFPLDLCTDSFFTSRRPALEARLQLIHDAPEESLRAWVAATWHEQEGRVASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRHLAADFRHCRGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEVCHVVAVGAK 1012

The following BLAST results are available for this feature:

BLAST of TCONS_00061786-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061786-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FAN1	1.632e-105	32.02	Fanconi-associated nuclease 1 OS=Homo sapiens GN=F...	[more]

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TCONS_00061786-protein (polypeptide) - C. hemisphaerica