TCONS_00061897-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061897-protein
Unique NameTCONS_00061897-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1336

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061897-protein ID=TCONS_00061897-protein|Name=TCONS_00061897-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1336bp
VQNSIIMKIFQHCIVDVVKGKIKEMVGVSDVENGGVNSDPPPVVIKNGKS
SKLDEAEGSKDEKKEKEAPPAQISFGQLFSYADSVDYLLMTVATIASIGN
GIAQPASFVVFGQLIEKFVKFGASPGAFDISDDMKDFAIIYVIIGACMFV
CSFFQAGFWSMTSIRQIHKIRLSFFDSILRQDIGWYDVEESGSLTTRLTD
DLIKVQAGMGEKIGMALQALAMFFGGFGIGFFYSWELTLVILAVTPALII
VGAIFGKIMGNMSESEQTSYAEAGGIAEEAFSSIRTVVAFCGEQDTIKRY
SEKLKDAERAGVKKALLLGGSMGAFHIVIFGCYALAFWHGSQMVADLKIN
AGELLIVFFCVMIGAAQLGQVGPSFEAISVSRGAAFKVFEIIKRVPTIDC
TSDKGTKLESVTGNIQFNDVHFHYPSREEMKILDGFNLTIEEGTTVALVG
ESGCGKSTCIKLVQRFYDVMQGSVTLDGHDLKTLNVNWLRKNIGVVSQEP
VLFDMTITENIKFGAIHQATQNEVEEAAKMANAHDFISKLPNKYNTNVGE
GGAQLSGGQKQRIAIARALIRNPKILLFDEATSALDTESEAIVQAALDRA
SKGRTTIIIAHRLSTVRNADKIVAVKEGKVAEQGKHDVLMAAKGVYHQLV
LLQTMVEEVAGELDSEELQNMSEAEKEKAVQAKLMRSLSTLSNESDEGKV
LADKFQRQLSSETSIRKSLRNKKESDLAVSPKKSGHSTKEDALKPSEEEE
EEEDKPEPAPMGRVMKLNAPEWPYMAVGSFFAALVGAFPVLFAFILSELI
EVFANPPEKIREDSKLWALLFLCLGFLDFFGLFFSSYLFGKAGEVLTTRL
RTKVFTALLRQNISYFDDPKNGTGHLTARLATDASNVKGATCSRLNIMIQ
TIVMGITALTIAFYYSWKLTLLILGFGPLLIFAGAAHMKVFTNFAADESS
NLIDASAIATEAIMNIRTVASIGKEKYFLAKYEEKLDEPFKKSVRNSNIF
GLTFGTSTSLMMLAQAAAFALGGKLVQDGDLVFDDMFKVILSTVFGAMIA
GQIASMAPDYLAAKVSAARCFAILDHEPEIDSYSTEGKKLDNVNGNINFQ
DVAFNYPNRPDVTVLKSLSFDIKSGQKIALVGSSGCGKSTSIGLLERFYN
PKEGRISIDGHEVKSFNLKWLRQQLGLVSQEPVLFARSIRDNIVYGLDRQ
VSDEEITKVCQNANVHSFIHSLPMGYDTLVGDKGTLISGGQKQRIAIARA
LIRDPKIMLLDEATSALDSESEKIVQNALDVAMEGRTSIIIAHRLSTIQN
SDVICVIQDGGVVEMGTHQELIAKKGAYYNLNQAQL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038815XLOC_038815Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061897TCONS_00061897Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR011527ABC1_TM_dom
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1324..1336
NoneNo IPR availableGENE3D1.20.1560.10coord: 72..404
e-value: 2.2E-70
score: 236.7
NoneNo IPR availableGENE3D1.20.1560.10coord: 737..1082
e-value: 3.3E-72
score: 242.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1094..1332
e-value: 1.6E-74
score: 250.0
coord: 412..650
e-value: 1.8E-78
score: 262.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 713..763
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..69
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 1097..1335
e-value: 2.98439E-139
score: 425.8
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 415..653
e-value: 3.71753E-144
score: 438.897
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 442..629
e-value: 5.3E-16
score: 69.2
coord: 1124..1327
e-value: 1.4E-14
score: 64.4
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 433..583
e-value: 2.9E-37
score: 128.1
coord: 1115..1265
e-value: 1.2E-34
score: 119.7
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 1097..1334
score: 25.744
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 415..652
score: 25.384
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 90..365
e-value: 3.9E-71
score: 239.8
coord: 777..1048
e-value: 9.2E-64
score: 215.6
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 92..378
score: 48.413
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 776..1062
score: 46.923
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 763..1079
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 78..396
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 555..569
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 1237..1251
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 405..653
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1089..1335

Blast
BLAST of TCONS_00061897-protein vs. Swiss-Prot (Human)
Match: MDR1 (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3)

HSP 1 Score: 1238.79 bits (3204), Expect = 0.000e+0
Identity = 631/1282 (49.22%), Postives = 858/1282 (66.93%), Query Frame = 0
Query:   73 ISFGQLFSYADSVDYLLMTVATIASIGNGIAQPASFVVFGQLIEKFVKFGA---------------SPGAF-DISDDMKDFAIIYVIIGACMFVCSFFQAGFWSMTSIRQIHKIRLSFFDSILRQDIGWYDVEESGSLTTRLTDDLIKVQAGMGEKIGMALQALAMFFGGFGIGFFYSWELTLVILAVTPALIIVGAIFGKIMGNMSESEQTSYAEAGGIAEEAFSSIRTVVAFCGEQDTIKRYSEKLKDAERAGVKKALLLGGSMGAFHIVIFGCYALAFWHGSQMVADLKINAGELLIVFFCVMIGAAQLGQVGPSFEAISVSRGAAFKVFEIIKRVPTIDCTSDKGTKLESVTGNIQFNDVHFHYPSREEMKILDGFNLTIEEGTTVALVGESGCGKSTCIKLVQRFYDVMQGSVTLDGHDLKTLNVNWLRKNIGVVSQEPVLFDMTITENIKFGAIHQATQNEVEEAAKMANAHDFISKLPNKYNTNVGEGGAQLSGGQKQRIAIARALIRNPKILLFDEATSALDTESEAIVQAALDRASKGRTTIIIAHRLSTVRNADKIVAVKEGKVAEQGKHDVLMAAKGVYHQLVLLQTMVEEVAGELDSEELQNMSEAEKEKAVQAKLMRSLSTLSNESDEGKVLADKFQRQLSSETSIRKSLRNKKESDLAVSPKKSGHSTKEDALKPSEEEEEEEDKPEPAPMGRVMKLNAPEWPYMAVGSFFAALVGAFPVLFAFILSELIEVFA--NPPEKIREDSKLWALLFLCLGFLDFFGLFFSSYLFGKAGEVLTTRLRTKVFTALLRQNISYFDDPKNGTGHLTARLATDASNVKGATCSRLNIMIQTIVMGITALTIAFYYSWKLTLLILGFGPLLIFAGAAHMKVFTNFAADESSNLIDASAIATEAIMNIRTVASIGKEKYFLAKYEEKLDEPFKKSVRNSNIFGLTFGTSTSLMMLAQAAAFALGGKLVQDGDLVFDDMFKVILSTVFGAMIAGQIASMAPDYLAAKVSAARCFAILDHEPEIDSYSTEGKKLDNVNGNINFQDVAFNYPNRPDVTVLKSLSFDIKSGQKIALVGSSGCGKSTSIGLLERFYNPKEGRISIDGHEVKSFNLKWLRQQLGLVSQEPVLFARSIRDNIVYGLD-RQVSDEEITKVCQNANVHSFIHSLPMGYDTLVGDKGTLISGGQKQRIAIARALIRDPKIMLLDEATSALDSESEKIVQNALDVAMEGRTSIIIAHRLSTIQNSDVICVIQDGGVVEMGTHQELIAKKGAYYNLNQAQ 1335
            +S   +F Y++ +D L M V T+A+I +G   P   +VFG++ + F   G                  G F ++ +DM  +A  Y  IGA + V ++ Q  FW + + RQIHKIR  FF +I+RQ+IGW+DV + G L TRLTDD+ K+  G+G+KIGM  Q++A FF GF +GF   W+LTLVILA++P L +  A++ KI+ + ++ E  +YA+AG +AEE  ++IRTV+AF G++  ++RY++ L++A+R G+KKA+    S+GA  ++I+  YALAFW+G+ +V   + + G++L VFF V+IGA  +GQ  PS EA + +RGAA+++F+II   P+ID  S  G K +++ GN++F +VHF YPSR+E+KIL G NL ++ G TVALVG SGCGKST ++L+QR YD  +G V++DG D++T+NV +LR+ IGVVSQEPVLF  TI ENI++G     T +E+E+A K ANA+DFI KLP+K++T VGE GAQLSGGQKQRIAIARAL+RNPKILL DEATSALDTESEA+VQ ALD+A KGRTTI+IAHRLSTVRNAD I    +G + E+G HD LM  KG+Y +LV +QT   EV       EL+N ++  K +      + +L   SN+S          +  L  + S R+S+R  +  D  +S K                E  +E  P P    R+MKLN  EWPY  VG F A + G     FA I S++I VF   + PE  R++S L++LLFL LG + F   F   + FGKAGE+LT RLR  VF ++LRQ++S+FDDPKN TG LT RLA DA+ VKGA  SRL ++ Q I    T + I+F Y W+LTLL+L   P++  AG   MK+ +  A  +   L  +  IATEAI N RTV S+ +E+ F   Y + L  P++ S+R ++IFG+TF  + ++M  + A  F  G  LV    + F+D+  V  + VFGAM  GQ++S APDY  AK+SAA    I++  P IDSYSTEG   + + GN+ F +V FNYP RPD+ VL+ LS ++K GQ +ALVGSSGCGKST + LLERFY+P  G++ +DG E+K  N++WLR  LG+VSQEP+LF  SI +NI YG + R VS EEI +  + AN+H+FI SLP  Y T VGDKGT +SGGQKQRIAIARAL+R P I+LLDEATSALD+ESEK+VQ ALD A EGRT I+IAHRLSTIQN+D+I V Q+G V E GTHQ+L+A+KG Y+++   Q
Sbjct:   34 VSVFSMFRYSNWLDKLYMVVGTLAAIIHGAGLPLMMLVFGEMTDIFANAGNLEDLMSNITNRSDINDTGFFMNLEEDMTRYAYYYSGIGAGVLVAAYIQVSFWCLAAGRQIHKIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISIGAAFLLIYASYALAFWYGTTLVLSGEYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYEIFKIIDNKPSIDSYSKSGHKPDNIKGNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENIRYGR-ENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFKLVTMQTAGNEV-------ELENAADESKSE------IDALEMSSNDS----------RSSLIRKRSTRRSVRGSQAQDRKLSTK----------------EALDESIP-PVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFGITFSFTQAMMYFSYAGCFRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQ 1274          
The following BLAST results are available for this feature:
BLAST of TCONS_00061897-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MDR10.000e+049.22Multidrug resistance protein 1 OS=Homo sapiens GN=... [more]
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