TCONS_00062079-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062079-protein
Unique NameTCONS_00062079-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length381

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062079-protein ID=TCONS_00062079-protein|Name=TCONS_00062079-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
MAEEPKEIPSSTSNEQATTETTVPPLKGVEVEINKKVHEEQNEKANEEQS
EKANEEKSEKANEEQKKEQVTEEEKMEVEESGEQEKAQLLEEEELLMEES
GETTDTSSEKANESRDYFDEDEMFQCLECKTKECAMWRKSKDKQGVICNL
CHLERIKGDSATNAPGQGGTNSNNNAASSSTSKTSSSLMQPPMKAKDVRI
SKRKNKQNKKFTNGFYGDRIIKSGHSKSRRSLYKRKPMKSVLGSSTIVAS
QSIYHDGLLYRVGDIVCTSDIEGGTYYAQLRGFLQDEYCEKSAVITWLIP
TKRNVTKFDPMLFVPGLDEETPRPMSCFSFVCRASTNLFKAPNMHPPYHR
SQCDLNDLIHVANAMNTESTEDHQLTTEGES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038903XLOC_038903Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062079TCONS_00062079Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013088Znf_NHR/GATA
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350Score = Score = Score = Score = SequenceCoilmobidb-litemobidb-liteSSF57716G3DSA:3.30.50.10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..116
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 121..157
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 119..210
e-value: 1.0E-5
score: 24.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062079-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MAEEPKEIPSSTSNEQATTETTVPPLKGVEVEINKKVHEEQNEKANEEQSEKANEEKSEKANEEQKKEQVTEEEKMEVEESGEQEKAQLLEEEELLMEESGETTDTSSEKANESRDYFDEDEMFQCLECKTKECAMWRKSKDKQGVICNLCHLERIKGDSATNAPGQGGTNSNNNAASSSTSKTSSSLMQPPMKAKDVRISKRKNKQNKKFTNGFYGDRIIKSGHSKSRRSLYKRKPMKSVLGSSTIVASQSIYHDGLLYRVGDIVCTSDIEGGTYYAQLRGFLQDEYCEKSAVITWLIPTKRNVTKFDPMLFVPGLDEETPRPMSCFSFVCRASTNLFKAPNMHPPYHRSQCDLNDLIHVANAMNTESTEDHQLTTEGES50100150200250300350Expect = 1.39e-30 / Id = 34.21SequenceGATD1
Match NameE-valueIdentityDescription
GATD11.390e-3034.21GATA zinc finger domain-containing protein 1 OS=Ho... [more]
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