TCONS_00062176-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062176-protein
Unique NameTCONS_00062176-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length332

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062176-protein ID=TCONS_00062176-protein|Name=TCONS_00062176-protein|organism=Clytia hemisphaerica|type=polypeptide|length=332bp
QRINSHDKMILTKIEESKQQFKTEIINNLKKYVVFLVALLVGLCITTIIF
FYVEECYFHVPEQCPANNQQTFELCQNVDTKNQTTTLNYTEAFEIYTKIT
KFCNHIELVECNKDGFIITSKENCDFTTTSFIKWMSFLCSTVFTIGYGHV
VAKSTLGRGLTILIAIFGIPMASATVLFCGKAINNTIKYLIVCFENTCLK
RGKIVWFKRKVATIQFLITILTFCLYSLYYHLTMFNNRSFFEAFYFVCIS
MLTIGFGDISPDFDYVSSLTTFQIIGLSAVEVTSFFWTFSLMASIIDFLT
SLETDLAGYPKKEKKTIMDENYVAKNNNAIDQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038982XLOC_038982Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062176TCONS_00062176Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0032802pore_dom_K_chnl
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005267potassium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0071805potassium ion transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071805 potassium ion transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005267 potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003280Two pore domain potassium channelPRINTSPR013332POREKCHANELcoord: 140..168
score: 36.64
coord: 252..261
score: 63.19
NoneNo IPR availableGENE3D1.10.287.70coord: 18..186
e-value: 3.7E-15
score: 55.1
NoneNo IPR availableGENE3D1.10.287.70coord: 197..303
e-value: 2.2E-9
score: 36.3
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 208..292
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 28..58
coord: 125..190
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 218..293
e-value: 4.1E-9
score: 36.2
coord: 126..183
e-value: 2.2E-9
score: 37.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062176-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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