TCONS_00062208-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062208-protein
Unique NameTCONS_00062208-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length438

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062208-protein ID=TCONS_00062208-protein|Name=TCONS_00062208-protein|organism=Clytia hemisphaerica|type=polypeptide|length=438bp
MKHNICMVSDFFYPNMGGVESHIYQLSQCLLARGHKVIVVTHAYGNRKGV
RYLTNNLKVYYLPFSIMYINVIQPTGFVTLPMFRDIFIREKITIVHGHSA
FSVLCQESIMHGKSMGLKTVFTDHSLFGFADVSSILTNKLLEFTLTDIDH
VICVSNTSKENTVLRASIHPDKVSVIANAVDSDVFTPDPTKKDASKITIA
VASRLVYRKGIDLLAGVIPILCQKFPQVQFIIGGDGPKRILLEEVREKYQ
LHERVQLLGELKHKDVRNLLVQGDIFLNTSLTEAFCIAIVEAASCGLQVV
STNVGGVFEVLPSDMIYLAEPSVQDITRVMEQAISDRVKGHVIDPFVLNQ
RIKSMYTWQNVSRKTETVYDSISNNVELSIMERLERFEGRAVIAGKFYVF
TVFVDLLFLFILDWLYPRDESQNHDTKTARQSDRKKFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039000XLOC_039000Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062208TCONS_00062208Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001296Glyco_trans_1
IPR013234PIGA_GPI_anchor_biosynthesis
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006506 GPI anchor biosynthetic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001296Glycosyl transferase, family 1PFAMPF00534Glycos_transf_1coord: 190..337
e-value: 1.2E-24
score: 86.7
NoneNo IPR availableGENE3D3.40.50.2000coord: 4..188
e-value: 6.8E-20
score: 70.8
NoneNo IPR availableGENE3D3.40.50.2000coord: 189..340
e-value: 4.1E-34
score: 117.0
NoneNo IPR availableCDDcd03796GT1_PIG-A_likecoord: 4..400
e-value: 0.0
score: 710.518
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 1..372
IPR013234PIGA, GPI anchor biosynthesisPFAMPF08288PIGAcoord: 42..131
e-value: 4.8E-42
score: 142.4

Blast
[Close]
BLAST of TCONS_00062208-protein vs. Swiss-Prot (Human)
Match: PIGA (Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1)

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 260/416 (62.50%), Postives = 323/416 (77.64%), Query Frame = 0 
Query:    3 HNICMVSDFFYPNMGGVESHIYQLSQCLLARGHKVIVVTHAYGNRKGVRYLTNNLKVYYLPFSIMYINVIQPTGFVTLPMFRDIFIREKITIVHGHSAFSVLCQESIMHGKSMGLKTVFTDHSLFGFADVSSILTNKLLEFTLTDIDHVICVSNTSKENTVLRASIHPDKVSVIANAVDSDVFTPDPTKKDASKITIAVASRLVYRKGIDLLAGVIPILCQKFPQVQFIIGGDGPKRILLEEVREKYQLHERVQLLGELKHKDVRNLLVQGDIFLNTSLTEAFCIAIVEAASCGLQVVSTNVGGVFEVLPSDMIYLAEPSVQDITRVMEQAISDRVKGHVIDPFVLNQRIKSMYTWQNVSRKTETVYDSISNNVELSIMERLERFEGR-AVIAGKFYVFTVFVDLLFLFILDWLYP 417
            HNICMVSDFFYPNMGGVESHIYQLSQCL+ RGHKVI+VTHAYGNRKG+RYLT+ LKVYYLP  +MY      T F +LP+ R IF+RE++TI+H HS+FS +  +++ H K+MGL+TVFTDHSLFGFADVSS+LTNKLL  +L D +H+ICVS TSKENTVLRA+++P+ VSVI NAVD   FTPDP ++  S ITI V SRLVYRKGIDLL+G+IP LCQK+P + FIIGG+GPKRI+LEEVRE+YQLH+RV+LLG L+HKDVRN+LVQG IFLNTSLTEAFC+AIVEAASCGLQVVST VGG+ EVLP ++I L EPSV+ +   +E+AI     G +  P  ++  +K+ YTW+NV+ +TE VYD +S    L + +RL+R       + G  +      + LFL  L W+ P
Sbjct:   33 HNICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSGLKVYYLPLKVMYNQSTATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPDPFRRHDS-ITIVVVSRLVYRKGIDLLSGIIPELCQKYPDLNFIIGGEGPKRIILEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPENIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVFNFLFLIFLRWMTP 447
The following BLAST results are available for this feature:
BLAST of TCONS_00062208-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIGA0.000e+062.50Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
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