TCONS_00062302-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062302-protein
Unique Name	TCONS_00062302-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	402

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062302-protein ID=TCONS_00062302-protein|Name=TCONS_00062302-protein|organism=Clytia hemisphaerica|type=polypeptide|length=402bp
MNLVNEITHGGIHINRKMSNWTGILPSLINGSTTTAPTVNGSQMNITFGP
YCQSYDNTALNRVIFGVLIVVFIVGFLVNTLAVTVILASRSLRRQWTNLF
VASLNICDIGVILFVVSLRIDDYLYDGFCFDIHVCRLFNIADSIFHSCSI
SHLFVMAIERFIAVRMPFVYQRYFNHRTTIQIICATWLYSIGWGVAGSFK
WDAQDGIIQSSSFINEGVKRKCLVDNTYGMLAIVFVIYLVPLIIMAVLYA
LILKTALEQQRMISSLAPSYLRQDDHATQKRKQEVSASKTVAVIYGAFAL
CWLPNFIIIIILQQCPECIVPFQIEHPELSKAIFTIFIVLLPAIHSCLNP
FIYIIFHRRFRKAFKILLQGKFKTLTEHSLRRNSAKSTGSSPKTIEMTIK
GS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_039041	XLOC_039041	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062302	TCONS_00062302	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000276	GPCR_Rhodpsn
IPR017452	GPCR_Rhodpsn_7TM

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000276	G protein-coupled receptor, rhodopsin-like	PRINTS	PR00237	GPCRRHODOPSN	coord: 230..253 score: 26.85 coord: 287..311 score: 31.27 coord: 335..361 score: 30.06 coord: 63..87 score: 23.41 coord: 97..118 score: 25.5 coord: 142..164 score: 26.79
IPR000276	G protein-coupled receptor, rhodopsin-like	PFAM	PF00001	7tm_1	coord: 79..353 e-value: 9.7E-43 score: 146.2
IPR000276	G protein-coupled receptor, rhodopsin-like	PROSITE	PS00237	G_PROTEIN_RECEP_F1_1	coord: 148..164
None	No IPR available	GENE3D	1.20.1070.10		coord: 38..393 e-value: 4.2E-64 score: 215.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..402
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 35..390
IPR017452	GPCR, rhodopsin-like, 7TM	PROSITE	PS50262	G_PROTEIN_RECEP_F1_2	coord: 78..353 score: 36.881

Blast

[Close]

BLAST of TCONS_00062302-protein vs. Swiss-Prot (Human)
Match: AA2AR (Adenosine receptor A2a OS=Homo sapiens GN=ADORA2A PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.528e-26
Identity = 98/339 (28.91%), Postives = 149/339 (43.95%), Query Frame = 0

Query:   67 VLIVVFIVGFLVNTLAVTVILASRSLRRQWTNLFVASLNICDIGVILFVVSLRIDDYLYDGFCFDIHVCRLFNIADSIFHSCSISHLFVMAIERFIAVRMPFVYQRYFNHRTTIQIICATWLYSIGWGVAGSFKWD----AQDGIIQSSSFINEGVKRKCLVDNTYGMLAIV----FVIYLVPLIIMAVLYALILKTALEQ-QRMISSLAPSYLRQDDHATQKRKQEVSASKTVAVIYGAFALCWLPNFIIIIILQQCPECIVPFQIEHPELSKAIFTIFIVLLPAIHSCLNPFIYIIFHRRFRKAFKILLQGKFKTLTEHSLRRNSA-KSTGSSPKTI 395
            V + + ++  L N L    +  + +L+   TN FV SL   DI V +  +   I   +  GFC   H C        +    SI  L  +AI+R+IA+R+P  Y           II   W+ S   G+     W+     ++G   S     EG +  CL ++   M  +V    F   LVPL++M  +Y  I   A  Q ++M S   P      + A    ++EV A+K++A+I G FALCWLP  II      CP+C       H  L         ++L   +S +NPFIY    R FR+ F+       K +  H LR+    K+ G+S + +
Sbjct:   12 VELAIAVLAILGNVLVCWAVWLNSNLQNV-TNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQG-CGEG-QVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPG-----ERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC------SHAPL---WLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFR-------KIIRSHVLRQQEPFKAAGTSARVL 324

The following BLAST results are available for this feature:

BLAST of TCONS_00062302-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062302-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AA2AR	9.528e-26	28.91	Adenosine receptor A2a OS=Homo sapiens GN=ADORA2A ...	[more]

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TCONS_00062302-protein (polypeptide) - C. hemisphaerica