TCONS_00062420-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062420-protein
Unique NameTCONS_00062420-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062420-protein ID=TCONS_00062420-protein|Name=TCONS_00062420-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MNVFRKIHILRKVNASSRSGSYVQAETEESLSAVKLIAINPNENDEEDAA
PTTPMINNRPSSGGGEREGLEEAAAEGAIDKVKHSSISAIDTILTNFTGV
GTADDKEVFEDESLSADVTLLQASSEGNITLVKSRIAALQEESKKLTSDL
DKVKALVSKELDRLDEKDFSALHLASRYNRKNVIKALLDAGANIDLVGSE
GLTPLHLATKYDMTSAAKFXFSRLALSFFMIIYTKMHNYKPLNVTEPDFR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039104XLOC_039104Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062420TCONS_00062420Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..156
NoneNo IPR availablePFAMPF13857Ank_5coord: 160..208
e-value: 1.0E-8
score: 35.2
NoneNo IPR availableCDDcd00204ANKcoord: 149..219
e-value: 3.06859E-13
score: 62.7862
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 167..196
e-value: 5.6E-5
score: 32.5
coord: 200..230
e-value: 420.0
score: 7.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 167..199
score: 11.594
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 24..225
e-value: 2.0E-15
score: 56.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 167..210
score: 16.733
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 148..222

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062420-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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