|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00062476-protein ID=TCONS_00062476-protein|Name=TCONS_00062476-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1016bp
MISQEEVCVWFKNLEGYSRIELMCALLDSCLPLELRFLGTYLEYSAGKHY
THLQKWEKDANKTSTWLTDKEDFFNKDFRRKFCIFLALLHSHNRSIAVKL
FDVLNKWERCINSEADKKSDNLNSRKKQEENCDKVSFCNEMRLLFSMASL
HPALDFAQRAKLRNKKESFVSSCQKPDTEHLYEIENGYIEVDDNSDSDLP
TENLDTSKLDSLPKEETRISTTRTPSLPSNNTLTTQTSIGQHTETPIPAP
VPTNRSMVPEALQNIPHLTNISVLDNNGFHQMPPYRTPPMLFSRPQMSST
GTVYHRTLDPQSIQMPVGMPTIQCVVNNQQYVQNNISIHANSNTKNIGNV
FSPTTSADLSRQSPLVSSELTIQQSPLVPNNDLLRVQSPLIPSNRTSDTL
NNFNIVKLPGSQYGQIPRTMMNGPIGSPSLDDGSIPAHARHSGNVIVTCS
GMVGGVSTIVSSMASINHQSNNQRRCYSESDANENINIGGSQEQLPLNQP
RLIPYENKFHYFNSMQQMPFGNSQVHMSPKFFTATQNIQNMSTNNTVNIS
DSTPVPHQQQPIIIPYNTQQQQQQQQQRQQNQQQHQQHNMHNNMSSMVVH
STMPNIMTTNTAPVSVNPTPQQSLPTSKTEDKQPPPLMNQVISPSLTKNI
PLGANGTYMPSQLPEKGISGNRILYSEQQRKFDFFMTKSDNNSNRSLPIP
VQRRPYHNVNRYSNDVSPASSPSSSPRPSPLCSPSHSPLPSRKTTINTST
ILTTSNKEFSDIYANTVNWLKSIRLHKYSNDLEHLSFKELSDMDEGSFKK
IGLTVGASTKLKTQLDVLVNRGFKEFGDPDNLTNPDLPQHGTSPSSLSPI
SAKYLNSGTTTQQQQSSDPHPVKLDDEDSKSMTNRVVVVHEDSLLNDGVE
MNERGDGMNERENEHSDEDDEVFQQQQHEARKKSSSVTATCYNCGHVGHY
GDECTDETMEAITYNRYAFQLDYSRNESPTSSNTSTSSVKSSTVTVTTPI
TSKTSVTMTTDDVTNR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001878 | Zinc finger, CCHC-type | GENE3D | 4.10.60.10 | | coord: 901..991
e-value: 2.9E-6
score: 26.9 |
| IPR001878 | Zinc finger, CCHC-type | PROSITE | PS50158 | ZF_CCHC | coord: 941..956
score: 9.686 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 755..825
e-value: 2.9E-5
score: 23.7 |
| None | No IPR available | GENE3D | 1.10.110.10 | | coord: 292..624
e-value: 1.4E-7
score: 30.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 826..936 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 568..588 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 975..996 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 687..746 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 608..643 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 191..236 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 765..816 |
Blast
The following BLAST results are available for this feature:
|
