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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00062541-protein ID=TCONS_00062541-protein|Name=TCONS_00062541-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2448bp
MVLQDFTTTQINQQFIVGELFYGQTLPEKTDKRYYPGAHQVGNNRKIIHL
FYTMTKDDIANLNGQFTVMRENGDKVIFEIDTPPDRSKITSYVRMKDRVA
AGNVNKELEHFSNKQEQGTTISAELKHTSNTSGRNEQVHKRDGQCPKVVQ
CVNSEVQKTELNILNTSEAKEEKFDRANTCTPESLQSEDSELPDAQMSIS
NDSDAKEFATSTLTSSQKVRNRPTPCNDNNKQSDLNTSKEIFVGLDEKNS
ARITNRNSAGMVESTTQGHGNEKKERNVITSQSSFQQGEIQTHKDSTANK
PKKDSLRIQKFYLFHQTVKQQYLLNRYGEIVFILEIKPKQCGFRAIAVSL
FIICVQTNVDYQVVGTILCNKYNDHVKVLTEALTEFKEINSSWKPKYLII
HPSETMVSVVHHLFAGVEYYFNKDSCLQEWEEYLTNQKNGLKEHSTKLLR
DLETLQSSSSMDEFKQNANQLSRCPIWKSESTSTFRQNWFAGSKRWVACR
LPRNLLVLLKDEWLKSIIGCYEGAVILSTSRSSKEGGIVHLIERLTATLV
KDRFESYILKNKTYLTNNVLMAKQNLSLMTDLGIPLNMTSHCAHIINPMN
EIQPQIKKIKQINHNQFEVTTRKTHTNTTHIVTVAGNQAAFPSCSCAEWK
NNAILCQHMFMVIQSFKFQFDWLSPLYRESPFFKIDQISINSDLAESTSK
EDDREMISEPVQGPTTLVSTVLAPANNVKSSSGHSSKTKSGGEKSGFQIK
IAVQSSVDRVTARTINLASLKDGNATPVVDEINCLEKAHTVLVNKDEPSN
LNEKTDLEKEDSGFDDTIPTIPMMIEPQRSRSRQDVLEQSKGVSIGADSV
KTNSQHVANIKENLLKDSLNTINFAPSNVNENSRLHKDLAKADSKTKGAQ
IIEELTPAVTKGTFTLPPRRSIFKKNLQMNSCDIIVFKRFIVCMEELCYF
DENFIAQVKEEFQREIQRTDSENIILQSQNDYNTVEGSLATEFRNTDVTM
ATDNNELMPIIIDCKSLANQNGLNNVILADDITLNFTGTETSSLNNAKKE
DPRSVLGNFAKLSQSVFPDSSRQQSDRTNRKQNSIQFRSNNKSDQPLSLL
YQNQNLTINFPPNTRLSKNNFSTNEALTKPIDSLESLHKQSIKSASTANL
LSKNETSQLCDNLTRASVVASKTVTNVEKTSATTHTMKSPTIESNDNESC
RIVIPTKKRSFKFRKLNKQQKTTSPFASKEHQGNPQDETKQGNMSPISTS
DASYTNKRKYTSEQVLNTSSVRKKSRVDALPIPDNLPTEPDNGDQVEVIK
KQNYCRYCPESVRITSSTSTLKQNHHTAVTVSSSNKVSSKYSIKSSSVLA
STLSTRSVEKDIAISSKSAIVNHTKAILTKPLSTSPMFVSASNNIPILPK
QTVKEFSTKSVFANGNTPPILPKSLSASTTKEKSKASNTVTPKRVVASKT
KENYSPLSSIVVNSNKYTLSKPVITSKSKDGSIASKFLTTKRNTSFSPEA
LSKGIITDANKEPSVVLQNASNTPTVYMSKQTIDELKTWQSNTSAAPYMQ
GQLLPLISLGSTKVSLQNDVRGQQSISVTQHQLPFPKKTLFPQPTAVTAA
SSISPKQAVLMKPKAKRTNTSTLPQPQSSEIQKRRNWNELSSPITIDSKK
PSSNQSPTKSKEKKCSKQHQSHSKMPATSRNKNEAQKMGGPNSSSQINQN
LKTPIIQSTPDLNQPNMTLKTNHVMFQDPKRPNTIQWLGNQNRKLPLPIL
PTDYLQYYKLANQTALQTLLELKRKSLAEINANVQNPYALKKPLSNLQPS
NKQVKSSSKIDKRPVISPLVQNFLDNRSASFRELAARIYDEDMSNIQISQ
VKSLERSSTVKRKGNENITSDSIQTSVIVNPPERNIRSNQGVIEGSTTDT
SDEINADCEKSASRNIQLKQLDSLEKSTAKLQISINESMETSKSSMKNPS
ANTPQETDPSSKNTSPFDSLNNSLIENTFEESNRKIKEKLLQLEINDIKE
RIDSIKRKNLQKTIEPKLTEKNSIETHHHPTSSKGKENVNPSIHKKPTIK
AIKHKKKKWLDVDAFGKLRKRRKPKPKEPSKENENAIDSLECKPDMSVLS
RAISASITIPSKDKQILTEESNFQSQASNDSRKDSLSRFLPKNDEQFPSS
TRKLTDQLLSQPKQKRKSATNIFDLLNEVNRDEVIQTTQKRHRYNDPIKL
LKLQSDEQPEKQNDTPNPCPVFVQPQSLSDSIPIQSIYEGLIPEAEIKTE
PIDHDHTHERNLEQANFMKTLDTYLKNMKTSDSFLEQNLEEVKSGSPDVQ
NQSETFQFGANIDNQDFLESETNETWSTSSETSLTIDEQNRSPSSFYSFN
TESKSDNGEAPDFPYLTNIKLHDKDTEDAPTFSYXNIKLYDKDTEDAPTF
SYLPNNEPDETSNSAASDTTLSIEGRHMMTGFDRDFDIKDEPIDVVAL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007527 | Znf_SWIM |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 959..979 |
| None | No IPR available | COILS | Coil | Coil | coord: 1988..2008 |
| IPR007527 | Zinc finger, SWIM-type | PROSITE | PS50966 | ZF_SWIM | coord: 630..667
score: 9.47 |
Blast
The following BLAST results are available for this feature:
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