TCONS_00062638-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062638-protein
Unique NameTCONS_00062638-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length477

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062638-protein ID=TCONS_00062638-protein|Name=TCONS_00062638-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
MLTEKEKDIESLKDLTISIDKEEKIDISSNLLTDLDGIESCEKTLKWLNV
SHNRICSVKHLKGCTNLNVLNLSNNKITSLKHLKKLQSLKAIILNRNELS
TLDGITGLKELNTLVISNNKFTELDLNGWPKLQKFSATNNHFEAFPNCQA
LKSIGDIKLNHNAISEIPEWIKGCSRLKILDLGNNKLENFESIVSLKDLP
NLENLNLKGNPLCDDPDYIIKVKEAFPKLKTFDFKKLSELYFKAITERSK
REKKTQGSSNEKSEVKDRGFKKSVVTSTKSASPQENESDEGVKSEDDKSE
GGKKKYSKKRKLDEDNIGNENSLKNGTDSHVEDGSPTKKKPKKKKHKNDM
SSLTETSKGEILGEKNALNETDFQAEEIISKKRNKETFESEREKADSKNT
DEISSTKKSKKKKKKSKDGEDDSSTKKVGQKQTGVVSVIKVKKKSKKTKD
GGKNKDVLSAVVENEGLTFGTGTESCW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039254XLOC_039254Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062638TCONS_00062638Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14580LRR_9coord: 142..240
e-value: 1.7E-8
score: 34.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..456
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 3..293
e-value: 1.7E-44
score: 151.3
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 23..234
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 44..65
score: 7.758
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 201..222
score: 6.11
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 66..87
score: 9.822
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 176..197
score: 8.32
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 131..152
score: 4.917
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 21..42
score: 6.187
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 88..109
score: 6.534
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 153..174
score: 4.955
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 110..130
score: 5.671

Blast
[Close]
BLAST of TCONS_00062638-protein vs. Swiss-Prot (Human)
Match: LRGUK (Leucine-rich repeat and guanylate kinase domain-containing protein OS=Homo sapiens GN=LRGUK PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.157e-17
Identity = 65/216 (30.09%), Postives = 115/216 (53.24%), Query Frame = 0 
Query:   23 EKIDISSNLLTDLDGIESCEKTLKWLNVSHNRICSVKHLKGCTNLNVLNLSNNKITSLKHLKKLQSLKAIILNRNELSTLDGITGLKELNTLVISNNKFTELD-LNGWPKLQKFSATNNHFEAFPNCQALKSIGDIKLNHNAISEIPEWIKGCSRLKILDLGNNKLENFESIVSLKDLPNLENLNLKGNPLCDDPDYIIKVKEAFPKLKTFDFKKL 237
            +K+D+S+N + DL  + SC   L  LN S N + +  + K   NL   + S+N+I+ +  L    +L  +IL+ NE+  + G+     L  L ++NNK T ++ LN  P ++    +NN  E     + LK++ ++ L+HN IS + + ++    L++++L +NK+     I  +K+LP L  LNL  NP+ +  +Y   V     +L   D KK+
Sbjct:  152 QKLDLSANKIEDLSCV-SCMPYLLELNASQNNLTTFFNFKPPKNLKKADFSHNQISEICDLSAYHALTKLILDGNEIEEISGLEMCNNLIHLSLANNKITTINGLNKLP-IKILCLSNNQIEMITGLEDLKALQNLDLSHNQISSL-QGLENHDLLEVINLEDNKIAELREIEYIKNLPILRVLNLLENPIQEKSEYWFFVIFMLLRLTELDQKKI 364
The following BLAST results are available for this feature:
BLAST of TCONS_00062638-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRGUK1.157e-1730.09Leucine-rich repeat and guanylate kinase domain-co... [more]
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